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The map label for this gene is 29143740

Identifier: 29143740

GI number: 29143740

Start: 3516382

End: 3517440

Strand: Direct

Name: 29143740

Synonym: t3419

Alternate gene names: NA

Gene position: 3516382-3517440 (Clockwise)

Preceding gene: 29143739

Following gene: 29143741

Centisome position: 73.38

GC content: 55.24

Gene sequence:

>1059_bases
ATGAAGAAGAATACCCGCTTTGCTTTTAACGCTTACCTGCAGCAGCTGGCGCGTCTGAACGGTGTTGCAGTTGAAGAACT
GTCCAGCAAGTTCACCGTCGAACCGTCCGTGCAGCAGACGCTGGAAGACCAGATCCAGCAGTCCGCCGCTTTCCTGACAC
TGATTAACGTCACGCCAGTGACTGAGCAGTCCGGTCAGTTGCTGGGGCTGGGTGTTGGCAGCACCATTGCCGGAACCACT
GATACCACCGCGAAAGAGCGTGAACCTGTCGATCCGACGCTGATGGTCGATGTGGAATATAAATGCGAGCAGACTAACTT
TGACACGGTGCTGACCTACGCGAAGCTGGACCTGTGGGCGAAGTTTCAGGATTTCCAGGTGCGTATCCGTGACGCCATCG
TGAAACGTCAGGCACTGGACCGCATCATGATCGGCTTTAACGGCGTGAAGCGTGCGAAAACCTCCAACCGTAGCGAAAAC
CCGCTGCTGCAGGATGTGAATAAAGGCTGGCTGCAGAAAATCCGTGAGGATGCACCGGATCACGTCATGGGCAGCACCAC
CACGGGCGGTGAAACTACACCGGGTGCGGTGAAAGTCGGGAAAGGTGGCGAATATGCCAACCTAGACGCCGTAGTGATGG
ATGCCGTCAATGAGCTTATCGACGTGGTTTACCAGGACGATGACGATCTGGTGGTTATTTGCGGGCGTGAACTGCTGTCT
GACAAGTATTTCCCGCTGGTCAACAAAGAGCAGGAAAACAGTGAAAAACTGGCTGCCGATATGATCATCAGTCAGAAACG
CATGGGTGGCCTGCAGGCCGTGCGTGCGCCGTTCTTCCCGCCGAATGCGCTGCTAATCACCCGTCTGGATAACCTGTCCA
TCTACTGGCAGGAAGGCACCCGCCGCCGTTCAGTTATCGACAACCCGAAACGTGACCGGATTGAAAACTTTGAATCCGTT
AACGAAGCCTATGTGGTTGAGGACTACCGCTGCGCCGCACTGGTGGAAAACATCCAGATTGGCGATTTCAGCGCCGCTGC
AGCAGAAGCCGGAGCGTAA

Upstream 100 bases:

>100_bases
CTGAGTCATGAAGACAGCCGCCAGGACTACCGCCAGCGTGCAACAGGCGGTAACGCCCCCGCTGACACTCTGACCAATTG
CTGATGGAGCACAAAACCCG

Downstream 100 bases:

>100_bases
CCTATGAGCCTGAGTCCCGCACGGCAGCATCGCCTGCGCGTTCAGGCTGAACAGGCCGCCCGCGAGGGCGGCAGCGTTCG
CCACGCATCTGGCTATGACC

Product: major capsid protein

Products: NA

Alternate protein names: Capsid Protein; Phage Capsid Protein P2 Family; Phage Capsid Protein; Capsid Proteins; Phage Capsid Protein; Capsid; Phage-Related Capsid Completion Protein; Bacteriophage Capsid Protein; Gp2 Phage Capsid Protein P2 Family Protein; Phage-Related Capsid Protein; Phage Protein; Bacteriophage Capsid Protein N; Capsid-Like Protein; Capsid Protein Phage Origin; Prophage; Phage P2 Capsid GpN-Like Protein; Phage Capsid Protein N; Minor Capsid / Capsid Protein N*; Phage Capsid-Like Protein; Phage-Related Capsid Protein; Prophage Capsid Protein; Phage Gene; Bacteriophage Protein; Phage Capsid Family

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MKKNTRFAFNAYLQQLARLNGVAVEELSSKFTVEPSVQQTLEDQIQQSAAFLTLINVTPVTEQSGQLLGLGVGSTIAGTT
DTTAKEREPVDPTLMVDVEYKCEQTNFDTVLTYAKLDLWAKFQDFQVRIRDAIVKRQALDRIMIGFNGVKRAKTSNRSEN
PLLQDVNKGWLQKIREDAPDHVMGSTTTGGETTPGAVKVGKGGEYANLDAVVMDAVNELIDVVYQDDDDLVVICGRELLS
DKYFPLVNKEQENSEKLAADMIISQKRMGGLQAVRAPFFPPNALLITRLDNLSIYWQEGTRRRSVIDNPKRDRIENFESV
NEAYVVEDYRCAALVENIQIGDFSAAAAEAGA

Sequences:

>Translated_352_residues
MKKNTRFAFNAYLQQLARLNGVAVEELSSKFTVEPSVQQTLEDQIQQSAAFLTLINVTPVTEQSGQLLGLGVGSTIAGTT
DTTAKEREPVDPTLMVDVEYKCEQTNFDTVLTYAKLDLWAKFQDFQVRIRDAIVKRQALDRIMIGFNGVKRAKTSNRSEN
PLLQDVNKGWLQKIREDAPDHVMGSTTTGGETTPGAVKVGKGGEYANLDAVVMDAVNELIDVVYQDDDDLVVICGRELLS
DKYFPLVNKEQENSEKLAADMIISQKRMGGLQAVRAPFFPPNALLITRLDNLSIYWQEGTRRRSVIDNPKRDRIENFESV
NEAYVVEDYRCAALVENIQIGDFSAAAAEAGA
>Mature_352_residues
MKKNTRFAFNAYLQQLARLNGVAVEELSSKFTVEPSVQQTLEDQIQQSAAFLTLINVTPVTEQSGQLLGLGVGSTIAGTT
DTTAKEREPVDPTLMVDVEYKCEQTNFDTVLTYAKLDLWAKFQDFQVRIRDAIVKRQALDRIMIGFNGVKRAKTSNRSEN
PLLQDVNKGWLQKIREDAPDHVMGSTTTGGETTPGAVKVGKGGEYANLDAVVMDAVNELIDVVYQDDDDLVVICGRELLS
DKYFPLVNKEQENSEKLAADMIISQKRMGGLQAVRAPFFPPNALLITRLDNLSIYWQEGTRRRSVIDNPKRDRIENFESV
NEAYVVEDYRCAALVENIQIGDFSAAAAEAGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39093; Mature: 39093

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNTRFAFNAYLQQLARLNGVAVEELSSKFTVEPSVQQTLEDQIQQSAAFLTLINVTPV
CCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCEECCHHHHHHHHHHHHHHHEEEEEECCCC
TEQSGQLLGLGVGSTIAGTTDTTAKEREPVDPTLMVDVEYKCEQTNFDTVLTYAKLDLWA
CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHH
KFQDFQVRIRDAIVKRQALDRIMIGFNGVKRAKTSNRSENPLLQDVNKGWLQKIREDAPD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
HVMGSTTTGGETTPGAVKVGKGGEYANLDAVVMDAVNELIDVVYQDDDDLVVICGRELLS
CCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHC
DKYFPLVNKEQENSEKLAADMIISQKRMGGLQAVRAPFFPPNALLITRLDNLSIYWQEGT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEECCEEEEECCCC
RRRSVIDNPKRDRIENFESVNEAYVVEDYRCAALVENIQIGDFSAAAAEAGA
CCHHHCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCHHHHHCCCC
>Mature Secondary Structure
MKKNTRFAFNAYLQQLARLNGVAVEELSSKFTVEPSVQQTLEDQIQQSAAFLTLINVTPV
CCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCEECCHHHHHHHHHHHHHHHEEEEEECCCC
TEQSGQLLGLGVGSTIAGTTDTTAKEREPVDPTLMVDVEYKCEQTNFDTVLTYAKLDLWA
CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHH
KFQDFQVRIRDAIVKRQALDRIMIGFNGVKRAKTSNRSENPLLQDVNKGWLQKIREDAPD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
HVMGSTTTGGETTPGAVKVGKGGEYANLDAVVMDAVNELIDVVYQDDDDLVVICGRELLS
CCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHC
DKYFPLVNKEQENSEKLAADMIISQKRMGGLQAVRAPFFPPNALLITRLDNLSIYWQEGT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEECCEEEEECCCC
RRRSVIDNPKRDRIENFESVNEAYVVEDYRCAALVENIQIGDFSAAAAEAGA
CCHHHCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA