| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is wzxE [H]
Identifier: 29143693
GI number: 29143693
Start: 3470585
End: 3471835
Strand: Reverse
Name: wzxE [H]
Synonym: t3371
Alternate gene names: 29143693
Gene position: 3471835-3470585 (Counterclockwise)
Preceding gene: 29143694
Following gene: 29143692
Centisome position: 72.45
GC content: 55.88
Gene sequence:
>1251_bases ATGTCGCTTGCTAAAGCCTCCCTGTGGACGGCGGTCAGTACGCTGGTAAAAATTGGCGCCGGACTGCTGGTGGTGAAACT ACTGGCCGTCTCTTTCGGTCCGTCGGGCGTCGGACAAGCGGGTAACTTCCGCCAGATGATTACCGTGCTGGGCGTATTGG CTGGCGCCGGGATATTTAACGGCGTTACCAAACTCGTCGCACAACATCATGATGACCCGGCGCAGTTACGTACCGTGGTG GGAACCTCCTCCGCGATGGTATTGGGGTTCTCTACGCTGCTGGCGCTGGTCTTCCTGCTGGCGGCGGCGCCGATTAGCCA GGGACTGTTCGGTCATACGGACTATCAAGGGCTGGTGCGTCTGGTTGCGCTGGTACAAATGGGGATCGCCTGGGCGAACC TGCTGCTGGCGCTAATGAAGGGCTTTCGTGACGCGTCGGGTAATGCCTTATCGTTAATTGTCGGCAGCTTTTTGGGCGTC GCCGCCTGGTATCTCTGCTACCGTGTCGGCGGCTATGAAGGCGCTCTGCTTGGCCTGGCGCTGGTGCCGGCGCTGGTGGT AGTGCCAGCCGGTATAATACTGATTAAGCGCGGCACCGTCCCGCTACGCTATCTCAAGCCCTCCTGGGACAACGGTCTGG CAGGGCAACTCAGTAAATTTACCCTGATGGCGCTGATTACCTCTGTTACGATGCCGGTCGCCTATGTGATGATGCGAAAC CAACTGGCCGCGCACTATAGCTGGAGCGATGTCGGGATCTGGCAGGGCGTGAGCAGTATTTCTGATGCCTATCTACAATT TATCACCGCCTCCTTCAGCGTTTACCTGTTACCTACGCTCTCACGCCTGACGGAAAAACAGGACATTACGCGTGAAGTGG TAAAAGCGCTGAAATTTGTTTTACCGGCGGTTGCGGCGGCGAGTTTTACCGTCTGGCTATTGCGCGATTTTGCTATCTGG CTGCTTTTTTCCGCCAAATTCACCGCGATGCGCGATCTGTTCGCTTGGCAGTTAGTGGGCGACGTGCTGAAAGTCGGCGC CTATGTTTTCGGTTATCTGGTGATTGCCAAAGCGTCGTTGCGATTTTACATTCTGGCCGAAATTAGCCAGTTCATTCTGT TAACGGCGTTCGCTCACTGGCTGATTCCCGCTCACGGCGCGCTGGGTGCGGCACAGGCTTATATGGCCACCTATATTGTC TATTTTTCACTTTGTTGCGGCGTATTTTTACTCTGGCGTAGGCGAGCATGA
Upstream 100 bases:
>100_bases AAAGAGAGCGAACGTTTGTTGCGTCTGCCGCTGTTTTATAACCTTGCGCCCGTCGATCAACGAACGGTGATTACTACCTT GCTAAATTATTTCTCCTGAT
Downstream 100 bases:
>100_bases CTGTACTGATTCACGTCTTGGGATCGGATATCCCTCACCATAACCACACCGTGCTGCGGTTTTTCAATGATACGCTGGCC GCCACAGGCGAGCACGCGCG
Product: lipopolysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MSLAKASLWTAVSTLVKIGAGLLVVKLLAVSFGPSGVGQAGNFRQMITVLGVLAGAGIFNGVTKLVAQHHDDPAQLRTVV GTSSAMVLGFSTLLALVFLLAAAPISQGLFGHTDYQGLVRLVALVQMGIAWANLLLALMKGFRDASGNALSLIVGSFLGV AAWYLCYRVGGYEGALLGLALVPALVVVPAGIILIKRGTVPLRYLKPSWDNGLAGQLSKFTLMALITSVTMPVAYVMMRN QLAAHYSWSDVGIWQGVSSISDAYLQFITASFSVYLLPTLSRLTEKQDITREVVKALKFVLPAVAAASFTVWLLRDFAIW LLFSAKFTAMRDLFAWQLVGDVLKVGAYVFGYLVIAKASLRFYILAEISQFILLTAFAHWLIPAHGALGAAQAYMATYIV YFSLCCGVFLLWRRRA
Sequences:
>Translated_416_residues MSLAKASLWTAVSTLVKIGAGLLVVKLLAVSFGPSGVGQAGNFRQMITVLGVLAGAGIFNGVTKLVAQHHDDPAQLRTVV GTSSAMVLGFSTLLALVFLLAAAPISQGLFGHTDYQGLVRLVALVQMGIAWANLLLALMKGFRDASGNALSLIVGSFLGV AAWYLCYRVGGYEGALLGLALVPALVVVPAGIILIKRGTVPLRYLKPSWDNGLAGQLSKFTLMALITSVTMPVAYVMMRN QLAAHYSWSDVGIWQGVSSISDAYLQFITASFSVYLLPTLSRLTEKQDITREVVKALKFVLPAVAAASFTVWLLRDFAIW LLFSAKFTAMRDLFAWQLVGDVLKVGAYVFGYLVIAKASLRFYILAEISQFILLTAFAHWLIPAHGALGAAQAYMATYIV YFSLCCGVFLLWRRRA >Mature_415_residues SLAKASLWTAVSTLVKIGAGLLVVKLLAVSFGPSGVGQAGNFRQMITVLGVLAGAGIFNGVTKLVAQHHDDPAQLRTVVG TSSAMVLGFSTLLALVFLLAAAPISQGLFGHTDYQGLVRLVALVQMGIAWANLLLALMKGFRDASGNALSLIVGSFLGVA AWYLCYRVGGYEGALLGLALVPALVVVPAGIILIKRGTVPLRYLKPSWDNGLAGQLSKFTLMALITSVTMPVAYVMMRNQ LAAHYSWSDVGIWQGVSSISDAYLQFITASFSVYLLPTLSRLTEKQDITREVVKALKFVLPAVAAASFTVWLLRDFAIWL LFSAKFTAMRDLFAWQLVGDVLKVGAYVFGYLVIAKASLRFYILAEISQFILLTAFAHWLIPAHGALGAAQAYMATYIVY FSLCCGVFLLWRRRA
Specific function: Synthesis of enterobacterial common antigen (ECA). [C]
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790227, Length=416, Percent_Identity=88.9423076923077, Blast_Score=738, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002797 [H]
Pfam domain/function: PF01943 Polysacc_synt [H]
EC number: NA
Molecular weight: Translated: 44828; Mature: 44697
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAKASLWTAVSTLVKIGAGLLVVKLLAVSFGPSGVGQAGNFRQMITVLGVLAGAGIFN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH GVTKLVAQHHDDPAQLRTVVGTSSAMVLGFSTLLALVFLLAAAPISQGLFGHTDYQGLVR HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LVALVQMGIAWANLLLALMKGFRDASGNALSLIVGSFLGVAAWYLCYRVGGYEGALLGLA HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LVPALVVVPAGIILIKRGTVPLRYLKPSWDNGLAGQLSKFTLMALITSVTMPVAYVMMRN HHHHHHHHCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QLAAHYSWSDVGIWQGVSSISDAYLQFITASFSVYLLPTLSRLTEKQDITREVVKALKFV HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPAVAAASFTVWLLRDFAIWLLFSAKFTAMRDLFAWQLVGDVLKVGAYVFGYLVIAKASL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFYILAEISQFILLTAFAHWLIPAHGALGAAQAYMATYIVYFSLCCGVFLLWRRRA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLAKASLWTAVSTLVKIGAGLLVVKLLAVSFGPSGVGQAGNFRQMITVLGVLAGAGIFN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH GVTKLVAQHHDDPAQLRTVVGTSSAMVLGFSTLLALVFLLAAAPISQGLFGHTDYQGLVR HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LVALVQMGIAWANLLLALMKGFRDASGNALSLIVGSFLGVAAWYLCYRVGGYEGALLGLA HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LVPALVVVPAGIILIKRGTVPLRYLKPSWDNGLAGQLSKFTLMALITSVTMPVAYVMMRN HHHHHHHHCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QLAAHYSWSDVGIWQGVSSISDAYLQFITASFSVYLLPTLSRLTEKQDITREVVKALKFV HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPAVAAASFTVWLLRDFAIWLLFSAKFTAMRDLFAWQLVGDVLKVGAYVFGYLVIAKASL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFYILAEISQFILLTAFAHWLIPAHGALGAAQAYMATYIVYFSLCCGVFLLWRRRA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503 [H]