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The map label for this gene is ysgA [H]

Identifier: 29143656

GI number: 29143656

Start: 3430556

End: 3431368

Strand: Direct

Name: ysgA [H]

Synonym: t3330

Alternate gene names: 29143656

Gene position: 3430556-3431368 (Clockwise)

Preceding gene: 29143646

Following gene: 29143659

Centisome position: 71.59

GC content: 56.83

Gene sequence:

>813_bases
ATGACAACGACACATCCATCCGGCTTTGCACCTGCAGCTTCCCCACTTGCCCCTACGATGATTCATACACCTGATGGGGC
CATTAGCGCGGGGATAACGTCGATCCCCTCTCAGGGCGACGATATGCCAGCCTATTACGCCAGACCAAAGGCAAGCGACG
GCGCGCTGCCTGTGGTCATTGTGGTACAGGAAATTTTTGGCGTACATGAACACATTCGCGATATTTGCCGACGACTGGCG
CTGGAAGGCTATCTCGCTATCGCGCCGGAGCTCTATTTCCGCGAAGGCGACCCCAATGATTTCGCCGATATACCCACATT
ATTGAGCGGGCTGGTGGCTAAAGTACCCGATTCGCAAGTCCTTGCCGACCTGGATCACGTCGCCAGTTGGGCTTCGCGCA
ACGGCGGGGATGCGCATCGGCTGATGATCACCGGTTTTTGTTGGGGAGGCCGGATTACCTGGCTATACGCCGCGCACAAC
CCACAGTTAAAAGCAGCGGTAGCGTGGTACGGCAAGCTGGTGGGCGACACGTCACTCAATTCGCCGAAGCATCCCGTTGA
TATCGCCACCGATCTTAACGCGCCGGTACTGGGTTTATACGGCGGGCAGGATACCAGTATTCCACAGGAGAGCGTGGAAA
CCATGCGTCAGGCGCTACGCGCCGCTAATGCGAAGGCGGAAATCGTGGTCTATCCCGATGCAGGGCACGCGTTTAATGCC
GATTATCGTCCGGGCTACCACGAAGCCTCAGCGAAAGACGGCTGGCAAAGAATGTTGGAATGGTTCGCGCAGTACGGTGG
GAAAAAAGGCTAA

Upstream 100 bases:

>100_bases
CCAAGCATTGCACAAAAGATAGCCGCTTTAAGGCAATGTGGTTTGTTACACACTGTCTATAGTTAAGATTGCGCTATTTT
TTAAGGGTACGGAGAATACC

Downstream 100 bases:

>100_bases
CCACAGCGCATTACGATGTTTGTTGGGCCTACGAGACCGGAGTCGGTGTAGGCTCAACAAATCGTCATCGCCACGTTAGC
TATGCTTTACCACAGCATTT

Product: hydrolase

Products: NA

Alternate protein names: Dienelactone hydrolase; DLH [H]

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MTTTHPSGFAPAASPLAPTMIHTPDGAISAGITSIPSQGDDMPAYYARPKASDGALPVVIVVQEIFGVHEHIRDICRRLA
LEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDAHRLMITGFCWGGRITWLYAAHN
PQLKAAVAWYGKLVGDTSLNSPKHPVDIATDLNAPVLGLYGGQDTSIPQESVETMRQALRAANAKAEIVVYPDAGHAFNA
DYRPGYHEASAKDGWQRMLEWFAQYGGKKG

Sequences:

>Translated_270_residues
MTTTHPSGFAPAASPLAPTMIHTPDGAISAGITSIPSQGDDMPAYYARPKASDGALPVVIVVQEIFGVHEHIRDICRRLA
LEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDAHRLMITGFCWGGRITWLYAAHN
PQLKAAVAWYGKLVGDTSLNSPKHPVDIATDLNAPVLGLYGGQDTSIPQESVETMRQALRAANAKAEIVVYPDAGHAFNA
DYRPGYHEASAKDGWQRMLEWFAQYGGKKG
>Mature_269_residues
TTTHPSGFAPAASPLAPTMIHTPDGAISAGITSIPSQGDDMPAYYARPKASDGALPVVIVVQEIFGVHEHIRDICRRLAL
EGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDAHRLMITGFCWGGRITWLYAAHNP
QLKAAVAWYGKLVGDTSLNSPKHPVDIATDLNAPVLGLYGGQDTSIPQESVETMRQALRAANAKAEIVVYPDAGHAFNAD
YRPGYHEASAKDGWQRMLEWFAQYGGKKG

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI48994982, Length=269, Percent_Identity=90.7063197026022, Blast_Score=508, Evalue=1e-145,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: =3.1.1.45 [H]

Molecular weight: Translated: 29062; Mature: 28931

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTHPSGFAPAASPLAPTMIHTPDGAISAGITSIPSQGDDMPAYYARPKASDGALPVVI
CCCCCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
VVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPDSQV
HHHHHHHHHHHHHHHHHHHHHCCHHEECCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHH
LADLDHVASWASRNGGDAHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLVGDTSLN
HHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCCCC
SPKHPVDIATDLNAPVLGLYGGQDTSIPQESVETMRQALRAANAKAEIVVYPDAGHAFNA
CCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
DYRPGYHEASAKDGWQRMLEWFAQYGGKKG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TTTHPSGFAPAASPLAPTMIHTPDGAISAGITSIPSQGDDMPAYYARPKASDGALPVVI
CCCCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
VVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPDSQV
HHHHHHHHHHHHHHHHHHHHHCCHHEECCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHH
LADLDHVASWASRNGGDAHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLVGDTSLN
HHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCCCC
SPKHPVDIATDLNAPVLGLYGGQDTSIPQESVETMRQALRAANAKAEIVVYPDAGHAFNA
CCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
DYRPGYHEASAKDGWQRMLEWFAQYGGKKG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]