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The map label for this gene is yigN

Identifier: 29143654

GI number: 29143654

Start: 3427966

End: 3429396

Strand: Reverse

Name: yigN

Synonym: t3328

Alternate gene names: 29143654

Gene position: 3429396-3427966 (Counterclockwise)

Preceding gene: 29143655

Following gene: 29143653

Centisome position: 71.57

GC content: 54.02

Gene sequence:

>1431_bases
GTGGATATTACTCTTATGATAAGCGCCGTCGTGGCGCTGGCGGCTGGGGCGGTGATTGGCTGGCTGGCGACGAAAGCGCA
CGCCGATCAAATCCGCGCCGATCTTATCGAAGAACGGCGTGAGCTGGATATTGAACTTAGCGCGGCCCGGCAGCAATTAG
CGCAAGAAGCGCACTGGCGCAGTGAATGCGAGTTACTTAATAACGAACTGCGTAGCCTGCACAGTATTAATACCTCTCTG
GAAGCCGATCTGCGTGAAGTCACGACTCGTCTGGAAGCGACTCAACAACACGCGGAAGACAAAATCCGTCAGATGATCAA
CAGCGAACAGCGTTTAAGCGAGCAGTTTGAAAATCTGGCGAACCGTATCTTTGAACACAGTAATCGTCGCGTAGACGAAC
AAAACCGACAAAGCCTGAATAGCCTGCTGACGCCGCTGCGTGAGCAACTGGACGGTTTTCGCCGCCAGGTTCAGGAGAGT
TTTGGCAAAGAAGCGCAGGAGCGGCATACGCTGGCGCACGAAATTCGTAATTTGCAGCAGCTTAACGCGCAAATGGCGCA
GGAAGCGATCAACCTGACGCGCGCCCTGAAAGGGGACAATAAGGCACAAGGAAACTGGGGCGAAGTTGTGCTGGCGCGGG
TGCTGGAGGCATCCGGACTGCGTGAAGGCTACGAATACGAAACCCAGGTCAGTATTGAGAACGATGCGCGCTCGCGGATG
CAGCCGGATGTCATCGTCCGCTTGCCGCAGGGCAAAGATGTGGTCATCGACGCTAAAATGACGTTAGTCGCCTACGAGCG
TTACTTTAACGCTGAAGATGACTATACGCGCGAGGCCGCTTTACAAGAGCACATCGCCTCGGTGCGCAATCATATTCGCT
TACTGGGGCGTAAAGACTACCAGCAGCTTCCCGGCCTCCGCTCGCTGGACTATGTTCTGATGTTTATCCCCGTAGAACCC
GCTTTCCTGCTGGCGTTAGATAAACAGCCCGAACTGATAACCGAGGCGCTGAAAAATAACATTATGCTGGTAAGCCCCAC
GACGCTGCTGGTGGCGTTACGGACAATCGCCAACCTGTGGCGCTATGAACACCAGAGCCGCAATGCGCAGCACATCGCAG
ACAGAGCCAGTAAGCTCTACGATAAAATGCGGTTGTTCGTTGATGATATGTCAGCGATCGGTCAGAGTCTGGATAAAGCG
CAGGATAACTACCGCCAGGCGATGAAAAAACTTGCGTCGGGGCGTGGCAACGTTTTGGCGCAGGCGGAGGCCTTCCGGGG
GCTAGGCGTGGAAATCAAACGCGAGATTAATCCGGATTTAGCGGAACAGGCCGTTACGCAAGATGAAGAATATCGTTTAC
GATCGATCCCTGAAGGGCGGCAGGATGAACATTATCCCAATGATGAACGGGTGAAGCAGCAGTTAAGTTAA

Upstream 100 bases:

>100_bases
TCTTTTTGCGTGGCGCCTCGCAGGAAATCCCTTTTAAACTGGACGTTTATACAGCACAATTCTATTTTGTGCAGGACAGT
GTGGTTCCAGGAGAGGTGTT

Downstream 100 bases:

>100_bases
CCCATACGGAGTAGTTTAGTCCTGGCGCAGAGTAGGGCAAATTGGCCCAATCTGTTACACTTCTTGAACATTTTTATCGA
TAAGCAGGCACTGAGATGGT

Product: DNA recombination protein RmuC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MDITLMISAVVALAAGAVIGWLATKAHADQIRADLIEERRELDIELSAARQQLAQEAHWRSECELLNNELRSLHSINTSL
EADLREVTTRLEATQQHAEDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLTPLREQLDGFRRQVQES
FGKEAQERHTLAHEIRNLQQLNAQMAQEAINLTRALKGDNKAQGNWGEVVLARVLEASGLREGYEYETQVSIENDARSRM
QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTREAALQEHIASVRNHIRLLGRKDYQQLPGLRSLDYVLMFIPVEP
AFLLALDKQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQHIADRASKLYDKMRLFVDDMSAIGQSLDKA
QDNYRQAMKKLASGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVTQDEEYRLRSIPEGRQDEHYPNDERVKQQLS

Sequences:

>Translated_476_residues
MDITLMISAVVALAAGAVIGWLATKAHADQIRADLIEERRELDIELSAARQQLAQEAHWRSECELLNNELRSLHSINTSL
EADLREVTTRLEATQQHAEDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLTPLREQLDGFRRQVQES
FGKEAQERHTLAHEIRNLQQLNAQMAQEAINLTRALKGDNKAQGNWGEVVLARVLEASGLREGYEYETQVSIENDARSRM
QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTREAALQEHIASVRNHIRLLGRKDYQQLPGLRSLDYVLMFIPVEP
AFLLALDKQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQHIADRASKLYDKMRLFVDDMSAIGQSLDKA
QDNYRQAMKKLASGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVTQDEEYRLRSIPEGRQDEHYPNDERVKQQLS
>Mature_476_residues
MDITLMISAVVALAAGAVIGWLATKAHADQIRADLIEERRELDIELSAARQQLAQEAHWRSECELLNNELRSLHSINTSL
EADLREVTTRLEATQQHAEDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLTPLREQLDGFRRQVQES
FGKEAQERHTLAHEIRNLQQLNAQMAQEAINLTRALKGDNKAQGNWGEVVLARVLEASGLREGYEYETQVSIENDARSRM
QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTREAALQEHIASVRNHIRLLGRKDYQQLPGLRSLDYVLMFIPVEP
AFLLALDKQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQHIADRASKLYDKMRLFVDDMSAIGQSLDKA
QDNYRQAMKKLASGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVTQDEEYRLRSIPEGRQDEHYPNDERVKQQLS

Specific function: Involved in DNA recombination

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family

Homologues:

Organism=Escherichia coli, GI1790266, Length=475, Percent_Identity=87.5789473684211, Blast_Score=847, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RMUC_SALTI (P0A2B8)

Other databases:

- EMBL:   AL627278
- EMBL:   AE014613
- RefSeq:   NP_457782.1
- RefSeq:   NP_806996.1
- PRIDE:   P0A2B8
- GeneID:   1067983
- GeneID:   1249845
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AL513382_GR
- KEGG:   stt:t3328
- KEGG:   sty:STY3590
- HOGENOM:   HBG575414
- OMA:   RENENRN
- ProtClustDB:   PRK10361
- BioCyc:   SENT209261:T3328-MONOMER
- BioCyc:   SENT220341:STY3590-MONOMER
- InterPro:   IPR003798

Pfam domain/function: PF02646 RmuC

EC number: NA

Molecular weight: Translated: 54588; Mature: 54588

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDITLMISAVVALAAGAVIGWLATKAHADQIRADLIEERRELDIELSAARQQLAQEAHWR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SECELLNNELRSLHSINTSLEADLREVTTRLEATQQHAEDKIRQMINSEQRLSEQFENLA
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
NRIFEHSNRRVDEQNRQSLNSLLTPLREQLDGFRRQVQESFGKEAQERHTLAHEIRNLQQ
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
LNAQMAQEAINLTRALKGDNKAQGNWGEVVLARVLEASGLREGYEYETQVSIENDARSRM
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHCC
QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTREAALQEHIASVRNHIRLLGRKDY
CCCCEEECCCCCEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
QQLPGLRSLDYVLMFIPVEPAFLLALDKQPELITEALKNNIMLVSPTTLLVALRTIANLW
HHCCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHCCEEEECHHHHHHHHHHHHHHH
RYEHQSRNAQHIADRASKLYDKMRLFVDDMSAIGQSLDKAQDNYRQAMKKLASGRGNVLA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
QAEAFRGLGVEIKREINPDLAEQAVTQDEEYRLRSIPEGRQDEHYPNDERVKQQLS
HHHHHHCCCCHHHHHCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MDITLMISAVVALAAGAVIGWLATKAHADQIRADLIEERRELDIELSAARQQLAQEAHWR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SECELLNNELRSLHSINTSLEADLREVTTRLEATQQHAEDKIRQMINSEQRLSEQFENLA
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
NRIFEHSNRRVDEQNRQSLNSLLTPLREQLDGFRRQVQESFGKEAQERHTLAHEIRNLQQ
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
LNAQMAQEAINLTRALKGDNKAQGNWGEVVLARVLEASGLREGYEYETQVSIENDARSRM
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHCC
QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTREAALQEHIASVRNHIRLLGRKDY
CCCCEEECCCCCEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
QQLPGLRSLDYVLMFIPVEPAFLLALDKQPELITEALKNNIMLVSPTTLLVALRTIANLW
HHCCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHCCEEEECHHHHHHHHHHHHHHH
RYEHQSRNAQHIADRASKLYDKMRLFVDDMSAIGQSLDKAQDNYRQAMKKLASGRGNVLA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
QAEAFRGLGVEIKREINPDLAEQAVTQDEEYRLRSIPEGRQDEHYPNDERVKQQLS
HHHHHHCCCCHHHHHCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504