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The map label for this gene is yhcO [H]

Identifier: 29143611

GI number: 29143611

Start: 3368648

End: 3368920

Strand: Reverse

Name: yhcO [H]

Synonym: t3278

Alternate gene names: 29143611

Gene position: 3368920-3368648 (Counterclockwise)

Preceding gene: 29143612

Following gene: 29143607

Centisome position: 70.3

GC content: 44.69

Gene sequence:

>273_bases
ATGAATGTCTATACATTTGATTTTAATGATATTAAAAACCAAAGCGATTTTTATCGCGAGTTTACGCAGACGTTTGGCCT
TGCCAGTGAGAAAGTAAGCGATCTTGATACATTATGGGATGCGGTAATGAGCGATATCTTACCCCTACCGCTAGAGATTG
AGTTCGTTCACCTGCCTGATAAACTGCGCAGGCGCTACGGGGCGCTGATTTTACTCTTTGATGAAGCGGAAGAAGAGCTG
GAGGGACGGCTACGGTTTAATGTCCGGCATTGA

Upstream 100 bases:

>100_bases
AGAGTGCTCCGGGGCTAAAAGCGTTTCTGGAAGTGAAACCTCTGCATAATGATGCTTAGTAGTAAAACAGACAATTGTCT
GTCGGGGATGGTGGCTGGCT

Downstream 100 bases:

>100_bases
AAAAGCATAAAAAAGCCCCCGGCATGCGGGGGCAAGTCGTCGGGTTAGACGACGAAGGTTTACTTATACAACTCGGCGGT
GGCGTGCCAGTTATCACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MNVYTFDFNDIKNQSDFYREFTQTFGLASEKVSDLDTLWDAVMSDILPLPLEIEFVHLPDKLRRRYGALILLFDEAEEEL
EGRLRFNVRH

Sequences:

>Translated_90_residues
MNVYTFDFNDIKNQSDFYREFTQTFGLASEKVSDLDTLWDAVMSDILPLPLEIEFVHLPDKLRRRYGALILLFDEAEEEL
EGRLRFNVRH
>Mature_90_residues
MNVYTFDFNDIKNQSDFYREFTQTFGLASEKVSDLDTLWDAVMSDILPLPLEIEFVHLPDKLRRRYGALILLFDEAEEEL
EGRLRFNVRH

Specific function: Unknown

COG id: COG2732

COG function: function code K; Barstar, RNAse (barnase) inhibitor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the barstar family [H]

Homologues:

Organism=Escherichia coli, GI1789635, Length=90, Percent_Identity=76.6666666666667, Blast_Score=149, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000468 [H]

Pfam domain/function: PF01337 Barstar [H]

EC number: NA

Molecular weight: Translated: 10715; Mature: 10715

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVYTFDFNDIKNQSDFYREFTQTFGLASEKVSDLDTLWDAVMSDILPLPLEIEFVHLPD
CCEEEECCHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCH
KLRRRYGALILLFDEAEEELEGRLRFNVRH
HHHHHHCCEEEEECCCHHHHCCEEEEEECC
>Mature Secondary Structure
MNVYTFDFNDIKNQSDFYREFTQTFGLASEKVSDLDTLWDAVMSDILPLPLEIEFVHLPD
CCEEEECCHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCH
KLRRRYGALILLFDEAEEELEGRLRFNVRH
HHHHHHCCEEEEECCCHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]