Click here to switch to the map view.

The map label for this gene is yhbP

Identifier: 29143526

GI number: 29143526

Start: 3280912

End: 3281355

Strand: Reverse

Name: yhbP

Synonym: t3190

Alternate gene names: 29143526

Gene position: 3281355-3280912 (Counterclockwise)

Preceding gene: 29143528

Following gene: 29143524

Centisome position: 68.48

GC content: 57.43

Gene sequence:

>444_bases
ATGGACACACTTACCGCTATTGGCCGTTGGCTGGCGAAACAACACGTGGTGACCTGGTGCGTACACCATGAGGGAGAGCT
GTGGTGCGCCAATGCGTTTTATTTGTTCGATGCGCAAAACGTCGCGCTGTATCTGTTAACGGATGATAAAACCCGCCATG
CGCAAATGTCCGGCGCGTGCGCGCCAGTTGCGGGAACGGTCAATGGTCAGCCGAAAACGGTGGCGCGCATTCGCGGCGTG
CAGTTTAAAGGGGAAATTCGCCGTCTGGAGGGGCAGGAGAGCGACGCCGCGCGTAAAGCTTACCTTCGTCGCTTCCCGGT
CGCCAGGGTGCTGCCAGCGCCGGTATGGGAAATTCGGCTGGATGAAATTAAATTCACCGACAACACGCTGGGGTTTGGTA
AAAAACTGCACTGGTTACGTGACTCACGCGCCCAGCAGGCGTAG

Upstream 100 bases:

>100_bases
AAGCGCATTGTCTGCAGTACGAATCAGATACAGATACCAGGGTGTCATTGTCGCCATCAGCATGATAATTTTCAGGTTCC
CAGTATAAGCGAGAATAAAG

Downstream 100 bases:

>100_bases
CGCCTCGCGGTTAAATGCCGGCAGGTCGTCAGGCGTGCGGCTGGTCACCAGCTGATCTTTATCGACGACGACTTCCTGAT
CGTAAAATTCCGCGCCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MDTLTAIGRWLAKQHVVTWCVHHEGELWCANAFYLFDAQNVALYLLTDDKTRHAQMSGACAPVAGTVNGQPKTVARIRGV
QFKGEIRRLEGQESDAARKAYLRRFPVARVLPAPVWEIRLDEIKFTDNTLGFGKKLHWLRDSRAQQA

Sequences:

>Translated_147_residues
MDTLTAIGRWLAKQHVVTWCVHHEGELWCANAFYLFDAQNVALYLLTDDKTRHAQMSGACAPVAGTVNGQPKTVARIRGV
QFKGEIRRLEGQESDAARKAYLRRFPVARVLPAPVWEIRLDEIKFTDNTLGFGKKLHWLRDSRAQQA
>Mature_147_residues
MDTLTAIGRWLAKQHVVTWCVHHEGELWCANAFYLFDAQNVALYLLTDDKTRHAQMSGACAPVAGTVNGQPKTVARIRGV
QFKGEIRRLEGQESDAARKAYLRRFPVARVLPAPVWEIRLDEIKFTDNTLGFGKKLHWLRDSRAQQA

Specific function: Unknown

COG id: COG3787

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0306 family

Homologues:

Organism=Escherichia coli, GI1789544, Length=147, Percent_Identity=83.6734693877551, Blast_Score=258, Evalue=1e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHBP_SALA4 (B5F6S3)

Other databases:

- EMBL:   CP001138
- RefSeq:   YP_002148197.1
- ProteinModelPortal:   B5F6S3
- SMR:   B5F6S3
- GeneID:   6794247
- GenomeReviews:   CP001138_GR
- KEGG:   sea:SeAg_B3458
- HOGENOM:   HBG393211
- OMA:   WCANCFY
- ProtClustDB:   PRK03467
- HAMAP:   MF_00764
- InterPro:   IPR012349
- InterPro:   IPR009002
- InterPro:   IPR011194
- Gene3D:   G3DSA:2.30.110.10
- PIRSF:   PIRSF009554

Pfam domain/function: SSF50475 FMN_binding

EC number: NA

Molecular weight: Translated: 16688; Mature: 16688

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLTAIGRWLAKQHVVTWCVHHEGELWCANAFYLFDAQNVALYLLTDDKTRHAQMSGAC
CCHHHHHHHHHHHHHHEEEEEECCCCEEEEEEEEEEECCCEEEEEEECCCCCHHHCCCCC
APVAGTVNGQPKTVARIRGVQFKGEIRRLEGQESDAARKAYLRRFPVARVLPAPVWEIRL
CCEECCCCCCCCHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHCCHHHHCCCCEEEEEE
DEIKFTDNTLGFGKKLHWLRDSRAQQA
EEEEECCCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MDTLTAIGRWLAKQHVVTWCVHHEGELWCANAFYLFDAQNVALYLLTDDKTRHAQMSGAC
CCHHHHHHHHHHHHHHEEEEEECCCCEEEEEEEEEEECCCEEEEEEECCCCCHHHCCCCC
APVAGTVNGQPKTVARIRGVQFKGEIRRLEGQESDAARKAYLRRFPVARVLPAPVWEIRL
CCEECCCCCCCCHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHCCHHHHCCCCEEEEEE
DEIKFTDNTLGFGKKLHWLRDSRAQQA
EEEEECCCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA