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The map label for this gene is yraP [H]

Identifier: 29143523

GI number: 29143523

Start: 3279006

End: 3279581

Strand: Direct

Name: yraP [H]

Synonym: t3187

Alternate gene names: 29143523

Gene position: 3279006-3279581 (Clockwise)

Preceding gene: 29143522

Following gene: 29143525

Centisome position: 68.43

GC content: 56.25

Gene sequence:

>576_bases
ATGAAGGCATTTTCGCCGCTCGCAGTCCTTATTTCTGCGTTGCTATTGCAAGGTTGCGTCGCCGCCGCGGTAGTGGGTAC
GGCAGCCGTCGGCACCAAAGCCGCAACCGACCCGCGTAGCGTGGGCACCCAGGTGGATGACGGAACGCTGGAACTGCGTG
TCAGCAGCGCGCTGTCGAAAGATGAGCAAATCAAAAAAGAGACGCGCATCAATGTCACTGCTTATCAGGGCAAAGTTTTG
TTAGTGGGCCAGTCGCCAAACAGCGAACTCTCCGCACGCGCGAAACAGATAGCGATGGGCGTTGAAGGCACCACCGAGGT
CTATAACGAGATTCGCCAGGGTCAGCCTATCGGCCTGGGGACCGCCTCTAACGATACCTGGATCACCACGAAAGTTCGCT
CACAGCTACTGACCAGCGATCAGGTAAAATCGTCAAATGTGAAAGTCACCACCGAGAATGGCGAAGTGTTCCTGCTGGGC
CTGGTGACTGAACGTGAAGGTAAAGCGGCAGCAGACATCGCCAGCCGGGTGAGCGGCGTGAAACGCGTGACCACCGCCTT
TACGTATATTAAGTAA

Upstream 100 bases:

>100_bases
CAGCGCGCGCATTCAGGAAATGCATATGCTGACGGTAAACTGCCTGTGCGGTTTGATCGATAACACGCTTTTTCCTCACC
AGGATGATTAAGGAGTACAC

Downstream 100 bases:

>100_bases
CCGGTGTGCCGGGTGGCGATAAAAATGTGTAAATCGCGTCGCCATCCGGTAAATCATCCGGCTTCGCTACCCCGCTTTTT
CCCGCAGTTGCGATGAGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKAFSPLAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLELRVSSALSKDEQIKKETRINVTAYQGKVL
LVGQSPNSELSARAKQIAMGVEGTTEVYNEIRQGQPIGLGTASNDTWITTKVRSQLLTSDQVKSSNVKVTTENGEVFLLG
LVTEREGKAAADIASRVSGVKRVTTAFTYIK

Sequences:

>Translated_191_residues
MKAFSPLAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLELRVSSALSKDEQIKKETRINVTAYQGKVL
LVGQSPNSELSARAKQIAMGVEGTTEVYNEIRQGQPIGLGTASNDTWITTKVRSQLLTSDQVKSSNVKVTTENGEVFLLG
LVTEREGKAAADIASRVSGVKRVTTAFTYIK
>Mature_191_residues
MKAFSPLAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLELRVSSALSKDEQIKKETRINVTAYQGKVL
LVGQSPNSELSARAKQIAMGVEGTTEVYNEIRQGQPIGLGTASNDTWITTKVRSQLLTSDQVKSSNVKVTTENGEVFLLG
LVTEREGKAAADIASRVSGVKRVTTAFTYIK

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=191, Percent_Identity=92.6701570680628, Blast_Score=330, Evalue=4e-92,
Organism=Escherichia coli, GI1790836, Length=183, Percent_Identity=31.6939890710383, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 20097; Mature: 20097

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFSPLAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLELRVSSALSK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEEEHHHCCC
DEQIKKETRINVTAYQGKVLLVGQSPNSELSARAKQIAMGVEGTTEVYNEIRQGQPIGLG
HHHHHHHHEEEEEEECCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEC
TASNDTWITTKVRSQLLTSDQVKSSNVKVTTENGEVFLLGLVTEREGKAAADIASRVSGV
CCCCCCEEEHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHH
KRVTTAFTYIK
HHHHHHHHCCC
>Mature Secondary Structure
MKAFSPLAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLELRVSSALSK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEEEHHHCCC
DEQIKKETRINVTAYQGKVLLVGQSPNSELSARAKQIAMGVEGTTEVYNEIRQGQPIGLG
HHHHHHHHEEEEEEECCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEC
TASNDTWITTKVRSQLLTSDQVKSSNVKVTTENGEVFLLGLVTEREGKAAADIASRVSGV
CCCCCCEEEHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHH
KRVTTAFTYIK
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]