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The map label for this gene is yqjH [H]

Identifier: 29143474

GI number: 29143474

Start: 3222154

End: 3222921

Strand: Reverse

Name: yqjH [H]

Synonym: t3134

Alternate gene names: 29143474

Gene position: 3222921-3222154 (Counterclockwise)

Preceding gene: 29143476

Following gene: 29143473

Centisome position: 67.26

GC content: 55.6

Gene sequence:

>768_bases
ATGACGACATCATCCGCACGCTATCCACAGCGTGTTCGTAATGAACTGCGTTTTCGCGAGCTGACCGTTCTGCGGGTAGA
ACGTATTAGCGCAGGATTTCAGCGGATCGTACTTGGCGGCGAGGCGCTGGACGGTTTCACCTCCCTGGGCTTTGACGATC
ACACGAAAGTTTTTTTCCCTGAGCCAGGCTGTCGCTTTACGCCCCCGACAGTCACTGAGGAAGGCATTATCTGGGGGGAG
GGCGTTCGTCCGGTCTCCAGGGATTACACGCCGCTGTATGACGAGGCGCATCGCGAGCTGGCGCTGGATTTCTTTATCCA
CGATGGCGGCGTAGCCAGCCGTTGGGCAATGGAAGCCCGTGAAGGCGATACACTGACGATTGGCGGGCCGCGCGGTTCGC
TGGTGGTGCCGGAAGATTATGCTTGTCAGGTTTATGTCTGCGATGAGTCCGGTATGCCTGCGCTACGTCGTCGTCTGGAA
TCGCTTAGCCGTCTGCCTGCGCGCCCTGCGGTAACCGCGCTGGTGAGCATTCAGGATGCCGCATATCGCGATTATCTCGC
CCATTTGACGGATATTACTGTGGAATATGTTGTTGGCGGCGATGAACAGGCAATGCAAACGCGCCTGTCGCAGCTGGCAA
TACCAGAATCAGACTATTTCATCTGGATTACTGGCGAAGGCAAAACGGTAAAACGTTTAAGTCAGTGCTTTGAAAAGGGG
TTTGATCCACACCTGGTACGTGCGGCAGCCTATTGGCATCGTAAATAG

Upstream 100 bases:

>100_bases
CAGAACACTATCAAAAAACAGTTGCATTTTTACTGATTAACAATCATTATCATTTAAAACTTTAATTTAGATATATCGTA
TTACTTCACGAAGGCAAAAA

Downstream 100 bases:

>100_bases
CGGTATGGGGCGAGCCCTGTCAGAAACAAAAAAGCCACTCTTTAGAGTGGCTTAATTATATGATTTTAAAGCTAAAATTT
GGTGGCCCCTGCTGGACTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MTTSSARYPQRVRNELRFRELTVLRVERISAGFQRIVLGGEALDGFTSLGFDDHTKVFFPEPGCRFTPPTVTEEGIIWGE
GVRPVSRDYTPLYDEAHRELALDFFIHDGGVASRWAMEAREGDTLTIGGPRGSLVVPEDYACQVYVCDESGMPALRRRLE
SLSRLPARPAVTALVSIQDAAYRDYLAHLTDITVEYVVGGDEQAMQTRLSQLAIPESDYFIWITGEGKTVKRLSQCFEKG
FDPHLVRAAAYWHRK

Sequences:

>Translated_255_residues
MTTSSARYPQRVRNELRFRELTVLRVERISAGFQRIVLGGEALDGFTSLGFDDHTKVFFPEPGCRFTPPTVTEEGIIWGE
GVRPVSRDYTPLYDEAHRELALDFFIHDGGVASRWAMEAREGDTLTIGGPRGSLVVPEDYACQVYVCDESGMPALRRRLE
SLSRLPARPAVTALVSIQDAAYRDYLAHLTDITVEYVVGGDEQAMQTRLSQLAIPESDYFIWITGEGKTVKRLSQCFEKG
FDPHLVRAAAYWHRK
>Mature_254_residues
TTSSARYPQRVRNELRFRELTVLRVERISAGFQRIVLGGEALDGFTSLGFDDHTKVFFPEPGCRFTPPTVTEEGIIWGEG
VRPVSRDYTPLYDEAHRELALDFFIHDGGVASRWAMEAREGDTLTIGGPRGSLVVPEDYACQVYVCDESGMPALRRRLES
LSRLPARPAVTALVSIQDAAYRDYLAHLTDITVEYVVGGDEQAMQTRLSQLAIPESDYFIWITGEGKTVKRLSQCFEKGF
DPHLVRAAAYWHRK

Specific function: Unknown

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Vibrio vibriobactin/vulbinactin utilization protein viuB [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=254, Percent_Identity=72.0472440944882, Blast_Score=378, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 28735; Mature: 28604

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSSARYPQRVRNELRFRELTVLRVERISAGFQRIVLGGEALDGFTSLGFDDHTKVFFP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHEEEECCCHHCHHHHCCCCCCCEEEEC
EPGCRFTPPTVTEEGIIWGEGVRPVSRDYTPLYDEAHRELALDFFIHDGGVASRWAMEAR
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHEEEEEEEECCCCCHHHHHHCC
EGDTLTIGGPRGSLVVPEDYACQVYVCDESGMPALRRRLESLSRLPARPAVTALVSIQDA
CCCEEEECCCCCCEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AYRDYLAHLTDITVEYVVGGDEQAMQTRLSQLAIPESDYFIWITGEGKTVKRLSQCFEKG
HHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCC
FDPHLVRAAAYWHRK
CCHHHHHHHHHHCCC
>Mature Secondary Structure 
TTSSARYPQRVRNELRFRELTVLRVERISAGFQRIVLGGEALDGFTSLGFDDHTKVFFP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHEEEECCCHHCHHHHCCCCCCCEEEEC
EPGCRFTPPTVTEEGIIWGEGVRPVSRDYTPLYDEAHRELALDFFIHDGGVASRWAMEAR
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHEEEEEEEECCCCCHHHHHHCC
EGDTLTIGGPRGSLVVPEDYACQVYVCDESGMPALRRRLESLSRLPARPAVTALVSIQDA
CCCEEEECCCCCCEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AYRDYLAHLTDITVEYVVGGDEQAMQTRLSQLAIPESDYFIWITGEGKTVKRLSQCFEKG
HHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCC
FDPHLVRAAAYWHRK
CCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]