Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
---|---|
Accession | NC_004631 |
Length | 4,791,961 |
Click here to switch to the map view.
The map label for this gene is assT
Identifier: 29143453
GI number: 29143453
Start: 3197499
End: 3199295
Strand: Direct
Name: assT
Synonym: t3112
Alternate gene names: NA
Gene position: 3197499-3199295 (Clockwise)
Preceding gene: 29143452
Following gene: 29143454
Centisome position: 66.73
GC content: 48.97
Gene sequence:
>1797_bases ATGTTTGACCAATACCGGAAAACAATACTTGCCGGCGCCGTCGCACTGACATGCGGACTCACCGCAGCCAGTACGTTTGC CGCAGGTTTTCAACCGGCGCAGCCCGCAGGGAAATTAGGCGCAGTCGTTGTCGATCCTTACGGTAATGCCCCTCTCACCG CACTGGTGGAATTAGATAGCCATATTATTTCAGACGTTAAAGTTACTGTACATGGCAAAGGGGAAAAAGGCGTTCCCGTT ACTTATACCGTTGGGAAAGAGTCTTTAGAAACCTATGACGGTATTCCTATTTTTGGCCTTTATCAGAAATTTGCCAACAA CGTCACGGTAGAATATAAAGAAAACGGCAAAGCCATGAAGGATGACTATGTGGTGCAGACGTCCGCCATCGTCAACCATT ATATGGATAACCGTTCTATTTCAGATCTCCAGCAAACGAAAGTTATTAAAGTTGCGCCAGGATTTGAAGATCGCCTTTAT CTGGTAAATACCCATACCTTTACGCCGCAGGGCGCTGAATTTCACTGGCACGGCGAAAAAGATAAAAATGCGGGCATTCT TGATGCCGGCCCGGCGGGCGGGGCTTTGCCTTTCGATATCGCCCCTTATACGTTTGTGGTCGACACCCAGGGTGAATACC GCTGGTGGCTGGATCAAGATACCTTCTACAACGGCCACGATATGAATATCAACAAACGTGGCTACCTGATGGGGATTCGT GAAACGCCTCGCGGCACCTTTACCGCGGTGCAGGGCCAACACTGGTACGAGTTTGACATGATGGGGCAAATTCTTGCCGA TCATAAACTGCCGCGCGGGTTCCTGGACGCATCTCATGAATCCATCGAAACCGTGAACGGTACCGTACTGCTGCGCGTCG GCAAACGCGATTACCGCAAAGAAGACGGCATACATGTTCATACTATTCGTGACCAAATCATTGAGGTTGATAAGTCTGGC CGCGTAGTAGACGTTTGGGATTTAACCAAAATCCTCGACCCTATGCGTGATGCGCTGCTCGGCGCGCTGGATGCGGGCGC AGTATGCGTGAACGTCGATCTGGCCCATGCCGGACAGCAGGCGAAACTCGAACCGGATACGCCGTATGGCGATGCGCTTG GCGTTGGTGCCGGTCGTAACTGGGCGCACGTCAACTCTATCGCTTATGACGCGAAAGACGACTCCATCATCCTTTCTTCC CGCCATCAGGGTATTGTAAAAATTGGTCGCGATAAGCAGGTGAAATGGATACTGGCACCGTCTAAAGGCTGGAATAAGCA GCTAGCCAGTAAATTGCTGAAACCGGTAGACGATCATGGTAAGCCGTTGACCTGTGACGAAAACGGCAAGTGTAAGGACA CCGATTTCGATTTCACCTATACCCAACATACGGCATGGCTTTCCAGCAAAGGTACGTTAACGGTCTTTGATAACGGTGAT GGTCGCGGCCTGGAGCAACCGGCTCTACCGACCATGAAATATTCCCGTTTTGTCGAATATAAGATCGATGAGAAGAAAGG CACCGTACAACAAGTTTGGGAATACGGTAAAGAACGTGGATATGATTTCTATAGTCCTATTACCTCGGTTGTTGAATATC AAAAAGACCGCGACACCATGTTCGGCTTTGGCGGTTCTATTAACCTGTTCGACGTTGGTAAACCAACAGTCGGCAAACTG AATGAGATTGACTATAAAACGAAAGAAGTGAAAGTTGAAATTGATGTGCTGTCGGATAAACCCAACCAGACTCACTATCG TGCGTTACTGGTACATCCAACACAAATGTTTAAATAA
Upstream 100 bases:
>100_bases TTATATTTAAAGACCAATCATTTACCTCATTTATTATTCATAAAAACATAGTATATTCAGAAGTATTATATTTAGAAGTT GTATATAAGGAGATATATCC
Downstream 100 bases:
>100_bases ATCACGGGAAGGAATTAATATGTCATCTAAATGGATTACCTCTTTATTTAAAAGCGTAGTATTAACCGCGGCATTGGTCA CTCCTTTTGCGGCATCGGCT
Product: arylsulfate sulfotransferase
Products: NA
Alternate protein names: Arylsulfate Sulfotransferase; Fructose-Bisphosphate Aldolase; Outer Membrane Protein; Arylsulfate Sulfotransferase Degenerate; Sulfatase; Arylsulfatase
Number of amino acids: Translated: 598; Mature: 598
Protein sequence:
>598_residues MFDQYRKTILAGAVALTCGLTAASTFAAGFQPAQPAGKLGAVVVDPYGNAPLTALVELDSHIISDVKVTVHGKGEKGVPV TYTVGKESLETYDGIPIFGLYQKFANNVTVEYKENGKAMKDDYVVQTSAIVNHYMDNRSISDLQQTKVIKVAPGFEDRLY LVNTHTFTPQGAEFHWHGEKDKNAGILDAGPAGGALPFDIAPYTFVVDTQGEYRWWLDQDTFYNGHDMNINKRGYLMGIR ETPRGTFTAVQGQHWYEFDMMGQILADHKLPRGFLDASHESIETVNGTVLLRVGKRDYRKEDGIHVHTIRDQIIEVDKSG RVVDVWDLTKILDPMRDALLGALDAGAVCVNVDLAHAGQQAKLEPDTPYGDALGVGAGRNWAHVNSIAYDAKDDSIILSS RHQGIVKIGRDKQVKWILAPSKGWNKQLASKLLKPVDDHGKPLTCDENGKCKDTDFDFTYTQHTAWLSSKGTLTVFDNGD GRGLEQPALPTMKYSRFVEYKIDEKKGTVQQVWEYGKERGYDFYSPITSVVEYQKDRDTMFGFGGSINLFDVGKPTVGKL NEIDYKTKEVKVEIDVLSDKPNQTHYRALLVHPTQMFK
Sequences:
>Translated_598_residues MFDQYRKTILAGAVALTCGLTAASTFAAGFQPAQPAGKLGAVVVDPYGNAPLTALVELDSHIISDVKVTVHGKGEKGVPV TYTVGKESLETYDGIPIFGLYQKFANNVTVEYKENGKAMKDDYVVQTSAIVNHYMDNRSISDLQQTKVIKVAPGFEDRLY LVNTHTFTPQGAEFHWHGEKDKNAGILDAGPAGGALPFDIAPYTFVVDTQGEYRWWLDQDTFYNGHDMNINKRGYLMGIR ETPRGTFTAVQGQHWYEFDMMGQILADHKLPRGFLDASHESIETVNGTVLLRVGKRDYRKEDGIHVHTIRDQIIEVDKSG RVVDVWDLTKILDPMRDALLGALDAGAVCVNVDLAHAGQQAKLEPDTPYGDALGVGAGRNWAHVNSIAYDAKDDSIILSS RHQGIVKIGRDKQVKWILAPSKGWNKQLASKLLKPVDDHGKPLTCDENGKCKDTDFDFTYTQHTAWLSSKGTLTVFDNGD GRGLEQPALPTMKYSRFVEYKIDEKKGTVQQVWEYGKERGYDFYSPITSVVEYQKDRDTMFGFGGSINLFDVGKPTVGKL NEIDYKTKEVKVEIDVLSDKPNQTHYRALLVHPTQMFK >Mature_598_residues MFDQYRKTILAGAVALTCGLTAASTFAAGFQPAQPAGKLGAVVVDPYGNAPLTALVELDSHIISDVKVTVHGKGEKGVPV TYTVGKESLETYDGIPIFGLYQKFANNVTVEYKENGKAMKDDYVVQTSAIVNHYMDNRSISDLQQTKVIKVAPGFEDRLY LVNTHTFTPQGAEFHWHGEKDKNAGILDAGPAGGALPFDIAPYTFVVDTQGEYRWWLDQDTFYNGHDMNINKRGYLMGIR ETPRGTFTAVQGQHWYEFDMMGQILADHKLPRGFLDASHESIETVNGTVLLRVGKRDYRKEDGIHVHTIRDQIIEVDKSG RVVDVWDLTKILDPMRDALLGALDAGAVCVNVDLAHAGQQAKLEPDTPYGDALGVGAGRNWAHVNSIAYDAKDDSIILSS RHQGIVKIGRDKQVKWILAPSKGWNKQLASKLLKPVDDHGKPLTCDENGKCKDTDFDFTYTQHTAWLSSKGTLTVFDNGD GRGLEQPALPTMKYSRFVEYKIDEKKGTVQQVWEYGKERGYDFYSPITSVVEYQKDRDTMFGFGGSINLFDVGKPTVGKL NEIDYKTKEVKVEIDVLSDKPNQTHYRALLVHPTQMFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66587; Mature: 66587
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDQYRKTILAGAVALTCGLTAASTFAAGFQPAQPAGKLGAVVVDPYGNAPLTALVELDS CCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCEEEEEEHHH HIISDVKVTVHGKGEKGVPVTYTVGKESLETYDGIPIFGLYQKFANNVTVEYKENGKAMK HHCCEEEEEEECCCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHCCEEEEECCCCCCCC DDYVVQTSAIVNHYMDNRSISDLQQTKVIKVAPGFEDRLYLVNTHTFTPQGAEFHWHGEK CCEEEEHHHHHHHHHCCCCHHHHHHCEEEEECCCCCCCEEEEEEEEECCCCCEEEECCCC DKNAGILDAGPAGGALPFDIAPYTFVVDTQGEYRWWLDQDTFYNGHDMNINKRGYLMGIR CCCCCEEECCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEECCCCCCCCCCEEEEEEE ETPRGTFTAVQGQHWYEFDMMGQILADHKLPRGFLDASHESIETVNGTVLLRVGKRDYRK ECCCCCEEEECCCCEEEHHHHHHHHHHCCCCCCHHCCCCHHHEECCCEEEEEECCCCCCC EDGIHVHTIRDQIIEVDKSGRVVDVWDLTKILDPMRDALLGALDAGAVCVNVDLAHAGQQ CCCEEEEEECHHHEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCC AKLEPDTPYGDALGVGAGRNWAHVNSIAYDAKDDSIILSSRHQGIVKIGRDKQVKWILAP CCCCCCCCCCCEEECCCCCCEEEECEEEECCCCCEEEEECCCCCEEEECCCCEEEEEECC SKGWNKQLASKLLKPVDDHGKPLTCDENGKCKDTDFDFTYTQHTAWLSSKGTLTVFDNGD CCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCC GRGLEQPALPTMKYSRFVEYKIDEKKGTVQQVWEYGKERGYDFYSPITSVVEYQKDRDTM CCCCCCCCCCCHHHCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCE FGFGGSINLFDVGKPTVGKLNEIDYKTKEVKVEIDVLSDKPNQTHYRALLVHPTQMFK EECCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEECCHHHCC >Mature Secondary Structure MFDQYRKTILAGAVALTCGLTAASTFAAGFQPAQPAGKLGAVVVDPYGNAPLTALVELDS CCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCEEEEEEHHH HIISDVKVTVHGKGEKGVPVTYTVGKESLETYDGIPIFGLYQKFANNVTVEYKENGKAMK HHCCEEEEEEECCCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHCCEEEEECCCCCCCC DDYVVQTSAIVNHYMDNRSISDLQQTKVIKVAPGFEDRLYLVNTHTFTPQGAEFHWHGEK CCEEEEHHHHHHHHHCCCCHHHHHHCEEEEECCCCCCCEEEEEEEEECCCCCEEEECCCC DKNAGILDAGPAGGALPFDIAPYTFVVDTQGEYRWWLDQDTFYNGHDMNINKRGYLMGIR CCCCCEEECCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEECCCCCCCCCCEEEEEEE ETPRGTFTAVQGQHWYEFDMMGQILADHKLPRGFLDASHESIETVNGTVLLRVGKRDYRK ECCCCCEEEECCCCEEEHHHHHHHHHHCCCCCCHHCCCCHHHEECCCEEEEEECCCCCCC EDGIHVHTIRDQIIEVDKSGRVVDVWDLTKILDPMRDALLGALDAGAVCVNVDLAHAGQQ CCCEEEEEECHHHEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCC AKLEPDTPYGDALGVGAGRNWAHVNSIAYDAKDDSIILSSRHQGIVKIGRDKQVKWILAP CCCCCCCCCCCEEECCCCCCEEEECEEEECCCCCEEEEECCCCCEEEECCCCEEEEEECC SKGWNKQLASKLLKPVDDHGKPLTCDENGKCKDTDFDFTYTQHTAWLSSKGTLTVFDNGD CCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCC GRGLEQPALPTMKYSRFVEYKIDEKKGTVQQVWEYGKERGYDFYSPITSVVEYQKDRDTM CCCCCCCCCCCHHHCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCE FGFGGSINLFDVGKPTVGKLNEIDYKTKEVKVEIDVLSDKPNQTHYRALLVHPTQMFK EECCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA