Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is nupG [H]
Identifier: 29143376
GI number: 29143376
Start: 3113345
End: 3114601
Strand: Direct
Name: nupG [H]
Synonym: t3026
Alternate gene names: 29143376
Gene position: 3113345-3114601 (Clockwise)
Preceding gene: 29143375
Following gene: 29143377
Centisome position: 64.97
GC content: 51.23
Gene sequence:
>1257_bases ATGAATCTTAAGCTGCAGCTTAAAATACTCTCTTTTCTGCAGTTCTGTCTGTGGGGAAGCTGGCTCACTACCCTGGGCTC GTATATGTTCGTCACCTTAAAATTTGACGGCGCATCTATTGGCGCAGTTTATAGTTCACTGGGGATTGCTGCCGTCTTTA TGCCGACCTTGCTAGGCATTGTGGCTGACAAATGGCTGAGCGCGAAATGGGTCTATGCCCTGTGTCATGTCGTCGGCGCC ATCACGCTATTCATGGCCGCGGAAGTCACTACGCCTGGGGCGATGTTCTTTGTGATCCTGCTTAACTCGTTGGCTTATAT GCCGACGTTGGGCTTGATCAATACTATATCGTATTACCGCCTGCAGTCTGCCGGCATGGATATTGTGACTGACTTTCCGC CTATCCGTATCTGGGGCACCATCGGCTTTATTCTGGCGATGTGGGGCGTGAGTTTCTCCGGTTTCGAGCTGAGCCATATG CAGCTTTATATCGGCGCGACGCTTTCCGTTCTGCTGGTACTGTTTACCTTTACCCTGCCGCACATTCCGGTGGCGAACCA ACAGAAAAACCAGAGCTGGACATCAATGCTGGGCCTTGACGCTTTTGCGCTGTTTAAAAACAAGCGGATGGCGATTTTCT TCATCTTCTCCATGATGCTGGGCGCGGAACTGCAGATCACCAACATGTTTGGCAACACCTTCCTGCATAGCTTTGATAAA GATCCGCTATTCGCCAGTAGCTTTATCGTGCAGCACGCCTCGGTGATGATGTCGATTTCGCAGATTTCTGAAACGTTATT CATCCTGACCATTCCGTTCTTCCTGAGCCGTTATGGTATTAAGAACGTTATGCTTATCAGTATTGTGGCGTGGATGCTGC GTTTCGGCCTGTTCGCTTATGGCGACCCGACGCCGTTCGGTACCGTTCTGCTGGTATTGCCGATGATTGTGTACGGCTGC GCCTTCGACTTCTTCAACATTTCTGGCTCGGTGTTTGTCGAAAAAGAAGTACGCCCGGAAATCCGCGCCAGCGCGCAGGG GATGTTCCTGATGATGACCAATGGCTTCGGCTGTATCCTTGGCGGCATTGTGAGCGGTAAAGTGGTGGAGTATTACACTC AAAACGGCATTACCGACTGGCAGACCGTGTGGCTCATCTTCGCAGGCTACTCGCTGGTGCTGGCCTTTGCGTTCGTAGCC TTGTTCAAATACAAACACGTTCGCGTTCCGGCAAGTTCGCAACCCGTTGCACATTAA
Upstream 100 bases:
>100_bases ACAAAAAAAGCCCGCCTCTCATTGATAGAATCACACCAAATCACAACGGCAAATGTGCCTTTTAAAACATTCATCCGCTC TCAGGTGTGAGGAAATTAAC
Downstream 100 bases:
>100_bases TCCTTGCCCTGTTTCGCAGGCCGGATAAGGCGTAAATGCCTTATCCGGCCTGCAGGCAACGTTACTTTAAAACATATCCA TACAAGCGTTTAATTCCATC
Product: nucleoside permease
Products: NA
Alternate protein names: Nucleoside-transport system protein nupG [H]
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVYSSLGIAAVFMPTLLGIVADKWLSAKWVYALCHVVGA ITLFMAAEVTTPGAMFFVILLNSLAYMPTLGLINTISYYRLQSAGMDIVTDFPPIRIWGTIGFILAMWGVSFSGFELSHM QLYIGATLSVLLVLFTFTLPHIPVANQQKNQSWTSMLGLDAFALFKNKRMAIFFIFSMMLGAELQITNMFGNTFLHSFDK DPLFASSFIVQHASVMMSISQISETLFILTIPFFLSRYGIKNVMLISIVAWMLRFGLFAYGDPTPFGTVLLVLPMIVYGC AFDFFNISGSVFVEKEVRPEIRASAQGMFLMMTNGFGCILGGIVSGKVVEYYTQNGITDWQTVWLIFAGYSLVLAFAFVA LFKYKHVRVPASSQPVAH
Sequences:
>Translated_418_residues MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVYSSLGIAAVFMPTLLGIVADKWLSAKWVYALCHVVGA ITLFMAAEVTTPGAMFFVILLNSLAYMPTLGLINTISYYRLQSAGMDIVTDFPPIRIWGTIGFILAMWGVSFSGFELSHM QLYIGATLSVLLVLFTFTLPHIPVANQQKNQSWTSMLGLDAFALFKNKRMAIFFIFSMMLGAELQITNMFGNTFLHSFDK DPLFASSFIVQHASVMMSISQISETLFILTIPFFLSRYGIKNVMLISIVAWMLRFGLFAYGDPTPFGTVLLVLPMIVYGC AFDFFNISGSVFVEKEVRPEIRASAQGMFLMMTNGFGCILGGIVSGKVVEYYTQNGITDWQTVWLIFAGYSLVLAFAFVA LFKYKHVRVPASSQPVAH >Mature_418_residues MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVYSSLGIAAVFMPTLLGIVADKWLSAKWVYALCHVVGA ITLFMAAEVTTPGAMFFVILLNSLAYMPTLGLINTISYYRLQSAGMDIVTDFPPIRIWGTIGFILAMWGVSFSGFELSHM QLYIGATLSVLLVLFTFTLPHIPVANQQKNQSWTSMLGLDAFALFKNKRMAIFFIFSMMLGAELQITNMFGNTFLHSFDK DPLFASSFIVQHASVMMSISQISETLFILTIPFFLSRYGIKNVMLISIVAWMLRFGLFAYGDPTPFGTVLLVLPMIVYGC AFDFFNISGSVFVEKEVRPEIRASAQGMFLMMTNGFGCILGGIVSGKVVEYYTQNGITDWQTVWLIFAGYSLVLAFAFVA LFKYKHVRVPASSQPVAH
Specific function: Transports nucleosides with a high affinity. Driven by a proton motive force [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli xapB and yegT [H]
Homologues:
Organism=Escherichia coli, GI87082192, Length=418, Percent_Identity=90.4306220095694, Blast_Score=760, Evalue=0.0, Organism=Escherichia coli, GI1788745, Length=418, Percent_Identity=59.3301435406699, Blast_Score=481, Evalue=1e-137, Organism=Escherichia coli, GI1788415, Length=425, Percent_Identity=30.8235294117647, Blast_Score=193, Evalue=2e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR004740 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46508; Mature: 46508
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVYSSLGIAAVFMPTLLGI CCEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH VADKWLSAKWVYALCHVVGAITLFMAAEVTTPGAMFFVILLNSLAYMPTLGLINTISYYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH LQSAGMDIVTDFPPIRIWGTIGFILAMWGVSFSGFELSHMQLYIGATLSVLLVLFTFTLP HHHCCCCEEECCCCEEHHHHHHHHHHHHCCCCCCEEEEHHHEEHHHHHHHHHHHHHHHCC HIPVANQQKNQSWTSMLGLDAFALFKNKRMAIFFIFSMMLGAELQITNMFGNTFLHSFDK CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCC DPLFASSFIVQHASVMMSISQISETLFILTIPFFLSRYGIKNVMLISIVAWMLRFGLFAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEEC GDPTPFGTVLLVLPMIVYGCAFDFFNISGSVFVEKEVRPEIRASAQGMFLMMTNGFGCIL CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCCEEEEEECCCHHHH GGIVSGKVVEYYTQNGITDWQTVWLIFAGYSLVLAFAFVALFKYKHVRVPASSQPVAH HHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC >Mature Secondary Structure MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVYSSLGIAAVFMPTLLGI CCEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH VADKWLSAKWVYALCHVVGAITLFMAAEVTTPGAMFFVILLNSLAYMPTLGLINTISYYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH LQSAGMDIVTDFPPIRIWGTIGFILAMWGVSFSGFELSHMQLYIGATLSVLLVLFTFTLP HHHCCCCEEECCCCEEHHHHHHHHHHHHCCCCCCEEEEHHHEEHHHHHHHHHHHHHHHCC HIPVANQQKNQSWTSMLGLDAFALFKNKRMAIFFIFSMMLGAELQITNMFGNTFLHSFDK CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCC DPLFASSFIVQHASVMMSISQISETLFILTIPFFLSRYGIKNVMLISIVAWMLRFGLFAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEEC GDPTPFGTVLLVLPMIVYGCAFDFFNISGSVFVEKEVRPEIRASAQGMFLMMTNGFGCIL CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCCEEEEEECCCHHHH GGIVSGKVVEYYTQNGITDWQTVWLIFAGYSLVLAFAFVALFKYKHVRVPASSQPVAH HHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3311747; 9278503 [H]