Click here to switch to the map view.

The map label for this gene is yggL [H]

Identifier: 29143371

GI number: 29143371

Start: 3109375

End: 3109701

Strand: Reverse

Name: yggL [H]

Synonym: t3021

Alternate gene names: 29143371

Gene position: 3109701-3109375 (Counterclockwise)

Preceding gene: 29143372

Following gene: 29143370

Centisome position: 64.89

GC content: 47.4

Gene sequence:

>327_bases
ATGGCAAAGAACCGTAGTCGTCGTCTGCGTAAAAAAATGCACATTGACGAATTCCAGGAATTAGGATTTTCGGTGGCATG
GCGTTTTCCGGAAGGTACATCTGAAGAGCAGATCGATAAGACTGTCGATGACTTTATTAATGACGTTATTGAGCCTAATA
AACTGGCGTTTGACGGCAGCGGCTACCTGGCCTGGGAAGGGCTGATTTGTATGCAGGAAATCGGTAAATGTACCGAAGAA
CATCAGGCGATTGTGCGTAAGTGGCTGGAAGCGCGCAACCTTGAAGAAGTCCGAACCAGCGAACTTTTCGACGTTTGGTG
GGACTAA

Upstream 100 bases:

>100_bases
ATGTACCGCGCCCGGAATCGCGCCCGGTAACGAAATTTGAACAACGTGGCCATCGTCTTGGTCATGGCGTATGGGACTTA
ATGTTCGAGAGGGTGAAATA

Downstream 100 bases:

>100_bases
TAAGTACAGGGTCGGCAAATGCCGGCCCGCTTTGTCTTGAGGGAAAGTTATGATGCGCAAAACGCTGCTGGCGGCAGTGC
TAACGTTTACGGCGATGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDDFINDVIEPNKLAFDGSGYLAWEGLICMQEIGKCTEE
HQAIVRKWLEARNLEEVRTSELFDVWWD

Sequences:

>Translated_108_residues
MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDDFINDVIEPNKLAFDGSGYLAWEGLICMQEIGKCTEE
HQAIVRKWLEARNLEEVRTSELFDVWWD
>Mature_107_residues
AKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDDFINDVIEPNKLAFDGSGYLAWEGLICMQEIGKCTEEH
QAIVRKWLEARNLEEVRTSELFDVWWD

Specific function: Unknown

COG id: COG3171

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0341 [H]

Homologues:

Organism=Escherichia coli, GI87082190, Length=108, Percent_Identity=96.2962962962963, Blast_Score=216, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007416 [H]

Pfam domain/function: PF04320 DUF469 [H]

EC number: NA

Molecular weight: Translated: 12809; Mature: 12677

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDDFINDVIEPNKLAFDGS
CCCCHHHHHHHHHCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEECCC
GYLAWEGLICMQEIGKCTEEHQAIVRKWLEARNLEEVRTSELFDVWWD
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDDFINDVIEPNKLAFDGS
CCCHHHHHHHHHCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEECCC
GYLAWEGLICMQEIGKCTEEHQAIVRKWLEARNLEEVRTSELFDVWWD
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 2001994 [H]