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The map label for this gene is 29143304

Identifier: 29143304

GI number: 29143304

Start: 3043685

End: 3045148

Strand: Reverse

Name: 29143304

Synonym: t2953

Alternate gene names: NA

Gene position: 3045148-3043685 (Counterclockwise)

Preceding gene: 29143306

Following gene: 29143303

Centisome position: 63.55

GC content: 47.75

Gene sequence:

>1464_bases
ATGGCTTACTCACGGCATATCAAGGCAGCACTTAGGGCAATCCATGCAGACAGACCCAACGCCTCCTATGAGGAAATGAG
GGAACACCTGAGGGACATCGCAGAGTGGGAGTTGTCTACAGGTCGTTCAGACCTCTTCGAGCCAGATATGAGAGATCTAT
ACCGTGACCAGTATGGGGAAGTGGGAGAGAATCTTGTCCATAGCGAGCCACTGACTATTGACCAGCATCGCTATATTAAT
GAGGCTCTTAATGTACTCAAGGCCTGCATGAAGCGCATTGAAGCGGGAGATAGCCAGCCACTTATAGATTATATAGATGG
ATTTGATGCTGCTGCTGGTGCTAATGACCAAGCCTCTGCAACTCTATCTGTTAGTGCTCCCCAAAAAACAAGCATTACTG
AAGGCAAACACTGCGTAACCGTTGCTTCTCTCTTTGAGCAGTACGAGCAGGAAAACGCCCAGAACTGGAAGCCAGCAACA
TTACGAGAAAACAAAGCTTCTCATGCTGCGTTAATCGAGGTTTTTGATTATCTGGGCCTCAATGCTGACGCCAATGTGTT
AGCTCGTGCGGATATGCTTAGGGTTCGGGATATCCTCCAGCAATTGCCGAAGAATCGTAAGCAGCGTTTCAAAGATGTTC
CGTTGGTTGACCTGCTAGGTCGTGAGGATAAAACCGATTGTCTGGATATTGTTACCATCAATAATAAATATCTCATTAAG
ATGGCGGCTGTTTTCAAGTGGGCCGTGCGTAATGACCTGATTAAAAAGAATATGACAGAAGGGCTAGAGCTTAAGGTTCC
CCAGCGTAAAGCCTCTGAGGCGCGTAATGCTTTCTCTACGGAGCAGGTAGGACAACTACTGGCTGCCGCCCAAGTTTACT
CACAGAGACCTTCTGGTAAGCCGTATCATTATTATGTTACCGCCTTGGCTGCTATCACTGGGGCGAGACTCAATGAAATA
GCCCAACTACAGGTCAAAGACGTCAGGACCACTGAGGCGGGAACCGTTTATATTCATATCAATGAAGACGATAGTAGTCT
ACCCGGTAAGAGCATCAAGAACGCTCATAGTGACCGCTGTGTGCCTCTGGTCGATGGGGCCTATGGTTTTATATTGGCTG
ACTTTATGAGGTTGGTTGAGACCCGTAGAGGCGCTGATGGTGATGACGCTATGGTGTTCGATGGTCTTCGCCTCATGAAG
AACGGTTACGGTGAGCAGGTGAGTAAATGGTTTAATCGGACGTTGTTGCCTAAAGTCCTCGCAGATCGTAGCGGCTTAGC
GTTTCACTCGTTTAGACATACAGTTGCGACCCAGTTAAAACAACATGGGGTCGAGTTGGCGTATGCACAGGCGATCATGG
GGCATAGTTCAGGGTCTATTACTTACGACCGTTATGCTAAAGAGGTTGAGGTTGATAGGCTGGTCAATGTGATGGCTGAT
GTTTATAAGGAGATTGTGGGGTAA

Upstream 100 bases:

>100_bases
CAGGATGAAGTCCACAGATCGCCTGACCGTTTCACATCCTTCCCATAGCCGTTATAAAATAGCGTCAGTATCACTACGGA
CTAAGGATAGACGTACAGCT

Downstream 100 bases:

>100_bases
CCAAGCTGTCCCCCCCCGGGGAGATTTGCCTTGAGGCTGACCATAGTCGATGACCATATTGCTACAGGCCTGTGTGGTCA
TGTTTTTGACTCACAGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase; Phage Integrase; Phage Integrase Family Site Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Phage-Related Integrase; Site-Specific Recombinase; Phage Integrase Family Protein; Integrase Domain-Containing Protein; Integrase/Resolvase Recombinase Protein; Prolidase (Xaa-Pro Dipeptidase

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MAYSRHIKAALRAIHADRPNASYEEMREHLRDIAEWELSTGRSDLFEPDMRDLYRDQYGEVGENLVHSEPLTIDQHRYIN
EALNVLKACMKRIEAGDSQPLIDYIDGFDAAAGANDQASATLSVSAPQKTSITEGKHCVTVASLFEQYEQENAQNWKPAT
LRENKASHAALIEVFDYLGLNADANVLARADMLRVRDILQQLPKNRKQRFKDVPLVDLLGREDKTDCLDIVTINNKYLIK
MAAVFKWAVRNDLIKKNMTEGLELKVPQRKASEARNAFSTEQVGQLLAAAQVYSQRPSGKPYHYYVTALAAITGARLNEI
AQLQVKDVRTTEAGTVYIHINEDDSSLPGKSIKNAHSDRCVPLVDGAYGFILADFMRLVETRRGADGDDAMVFDGLRLMK
NGYGEQVSKWFNRTLLPKVLADRSGLAFHSFRHTVATQLKQHGVELAYAQAIMGHSSGSITYDRYAKEVEVDRLVNVMAD
VYKEIVG

Sequences:

>Translated_487_residues
MAYSRHIKAALRAIHADRPNASYEEMREHLRDIAEWELSTGRSDLFEPDMRDLYRDQYGEVGENLVHSEPLTIDQHRYIN
EALNVLKACMKRIEAGDSQPLIDYIDGFDAAAGANDQASATLSVSAPQKTSITEGKHCVTVASLFEQYEQENAQNWKPAT
LRENKASHAALIEVFDYLGLNADANVLARADMLRVRDILQQLPKNRKQRFKDVPLVDLLGREDKTDCLDIVTINNKYLIK
MAAVFKWAVRNDLIKKNMTEGLELKVPQRKASEARNAFSTEQVGQLLAAAQVYSQRPSGKPYHYYVTALAAITGARLNEI
AQLQVKDVRTTEAGTVYIHINEDDSSLPGKSIKNAHSDRCVPLVDGAYGFILADFMRLVETRRGADGDDAMVFDGLRLMK
NGYGEQVSKWFNRTLLPKVLADRSGLAFHSFRHTVATQLKQHGVELAYAQAIMGHSSGSITYDRYAKEVEVDRLVNVMAD
VYKEIVG
>Mature_486_residues
AYSRHIKAALRAIHADRPNASYEEMREHLRDIAEWELSTGRSDLFEPDMRDLYRDQYGEVGENLVHSEPLTIDQHRYINE
ALNVLKACMKRIEAGDSQPLIDYIDGFDAAAGANDQASATLSVSAPQKTSITEGKHCVTVASLFEQYEQENAQNWKPATL
RENKASHAALIEVFDYLGLNADANVLARADMLRVRDILQQLPKNRKQRFKDVPLVDLLGREDKTDCLDIVTINNKYLIKM
AAVFKWAVRNDLIKKNMTEGLELKVPQRKASEARNAFSTEQVGQLLAAAQVYSQRPSGKPYHYYVTALAAITGARLNEIA
QLQVKDVRTTEAGTVYIHINEDDSSLPGKSIKNAHSDRCVPLVDGAYGFILADFMRLVETRRGADGDDAMVFDGLRLMKN
GYGEQVSKWFNRTLLPKVLADRSGLAFHSFRHTVATQLKQHGVELAYAQAIMGHSSGSITYDRYAKEVEVDRLVNVMADV
YKEIVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54653; Mature: 54521

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYSRHIKAALRAIHADRPNASYEEMREHLRDIAEWELSTGRSDLFEPDMRDLYRDQYGE
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
VGENLVHSEPLTIDQHRYINEALNVLKACMKRIEAGDSQPLIDYIDGFDAAAGANDQASA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCE
TLSVSAPQKTSITEGKHCVTVASLFEQYEQENAQNWKPATLRENKASHAALIEVFDYLGL
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
NADANVLARADMLRVRDILQQLPKNRKQRFKDVPLVDLLGREDKTDCLDIVTINNKYLIK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEEECCHHHHH
MAAVFKWAVRNDLIKKNMTEGLELKVPQRKASEARNAFSTEQVGQLLAAAQVYSQRPSGK
HHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
PYHYYVTALAAITGARLNEIAQLQVKDVRTTEAGTVYIHINEDDSSLPGKSIKNAHSDRC
CHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCEEEEEECCCCCCCCCHHHHCCCCCCC
VPLVDGAYGFILADFMRLVETRRGADGDDAMVFDGLRLMKNGYGEQVSKWFNRTLLPKVL
EEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ADRSGLAFHSFRHTVATQLKQHGVELAYAQAIMGHSSGSITYDRYAKEVEVDRLVNVMAD
HCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHH
VYKEIVG
HHHHHCC
>Mature Secondary Structure 
AYSRHIKAALRAIHADRPNASYEEMREHLRDIAEWELSTGRSDLFEPDMRDLYRDQYGE
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
VGENLVHSEPLTIDQHRYINEALNVLKACMKRIEAGDSQPLIDYIDGFDAAAGANDQASA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCE
TLSVSAPQKTSITEGKHCVTVASLFEQYEQENAQNWKPATLRENKASHAALIEVFDYLGL
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
NADANVLARADMLRVRDILQQLPKNRKQRFKDVPLVDLLGREDKTDCLDIVTINNKYLIK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEEECCHHHHH
MAAVFKWAVRNDLIKKNMTEGLELKVPQRKASEARNAFSTEQVGQLLAAAQVYSQRPSGK
HHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
PYHYYVTALAAITGARLNEIAQLQVKDVRTTEAGTVYIHINEDDSSLPGKSIKNAHSDRC
CHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCEEEEEECCCCCCCCCHHHHCCCCCCC
VPLVDGAYGFILADFMRLVETRRGADGDDAMVFDGLRLMKNGYGEQVSKWFNRTLLPKVL
EEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ADRSGLAFHSFRHTVATQLKQHGVELAYAQAIMGHSSGSITYDRYAKEVEVDRLVNVMAD
HCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHH
VYKEIVG
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA