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The map label for this gene is ppdC [H]

Identifier: 29143257

GI number: 29143257

Start: 2997531

End: 2997851

Strand: Reverse

Name: ppdC [H]

Synonym: t2905

Alternate gene names: 29143257

Gene position: 2997851-2997531 (Counterclockwise)

Preceding gene: 29143258

Following gene: 29143256

Centisome position: 62.56

GC content: 53.58

Gene sequence:

>321_bases
ATGTCGCATCCCCTGAATTTTCAACGCGGGTTTAGCCTCCCGGAAGTTTTAGTGGCGATGGTTCTAATGGTAATGATCGT
CACCGCGCTGTCAGGCTATCAGCGGGTATTAATGCACACTTTTGCATTACGACACCAGTATCTCCAGATCTGGCGGCAGG
CGTGGCAGCAAACGGCGCTGTATCCATTTTCGCCTGCTGACGGCTGGAATGCCAACCGGATGCAGACAACGCAATCGGGA
TGTGTCAGCATCAGCGTCACGATGGTTTCACCCTCTGGCAGGCAGGGGCAGATGACGCGCTTGCATTGTCCAAATCGTTA
A

Upstream 100 bases:

>100_bases
ATGGCATGACGTTATGGCGTTTGGGCAACGTCATTCAGGGAAGCATTGTCTTTTCTCCCCACGGCTGGAGTGATTTTTGT
CCGTTAAAAGAGGTGGCGTT

Downstream 100 bases:

>100_bases
TCGTCAGGAGTAATTATGTTAAGGGTCTACCACTCCAATCGTCTGGATGTGCTGGAAGCGTTGATGGAGTTCATCGTCGA
ACGCGAGCGGCTGGATGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSHPLNFQRGFSLPEVLVAMVLMVMIVTALSGYQRVLMHTFALRHQYLQIWRQAWQQTALYPFSPADGWNANRMQTTQSG
CVSISVTMVSPSGRQGQMTRLHCPNR

Sequences:

>Translated_106_residues
MSHPLNFQRGFSLPEVLVAMVLMVMIVTALSGYQRVLMHTFALRHQYLQIWRQAWQQTALYPFSPADGWNANRMQTTQSG
CVSISVTMVSPSGRQGQMTRLHCPNR
>Mature_105_residues
SHPLNFQRGFSLPEVLVAMVLMVMIVTALSGYQRVLMHTFALRHQYLQIWRQAWQQTALYPFSPADGWNANRMQTTQSGC
VSISVTMVSPSGRQGQMTRLHCPNR

Specific function: Not yet known [H]

COG id: COG4967

COG function: function code NU; Tfp pilus assembly protein PilV

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789187, Length=106, Percent_Identity=68.8679245283019, Blast_Score=155, Evalue=5e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022204
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF12528 DUF3728 [H]

EC number: NA

Molecular weight: Translated: 12096; Mature: 11965

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPLNFQRGFSLPEVLVAMVLMVMIVTALSGYQRVLMHTFALRHQYLQIWRQAWQQTAL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YPFSPADGWNANRMQTTQSGCVSISVTMVSPSGRQGQMTRLHCPNR
CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEECCCCCC
>Mature Secondary Structure 
SHPLNFQRGFSLPEVLVAMVLMVMIVTALSGYQRVLMHTFALRHQYLQIWRQAWQQTAL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YPFSPADGWNANRMQTTQSGCVSISVTMVSPSGRQGQMTRLHCPNR
CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3520484; 9278503; 7934814 [H]