Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is bsdD [H]
Identifier: 29143179
GI number: 29143179
Start: 2900654
End: 2900890
Strand: Direct
Name: bsdD [H]
Synonym: t2824
Alternate gene names: 29143179
Gene position: 2900654-2900890 (Clockwise)
Preceding gene: 29143178
Following gene: 29143192
Centisome position: 60.53
GC content: 51.9
Gene sequence:
>237_bases ATGATTTGTCCACGCTGTGCCGATGCACATATTGAACTCATGGCGACTTCGCCGGTAAAAGGAGTCTGGACGGTATATCA GTGTCAGCATTGTCTGTATACCTGGCGCGATACCGAACCGTTACGCCGTACCAGCCGCGAACACTATCCACAAGCGTTTC GCATGACGCAAAAAGATATTGATGACGCGCCAATGGTGCCGAGTATCCCGCCGTTGCTGGCAGAAGACAAACGGTAA
Upstream 100 bases:
>100_bases CGTGGTCACTATAGCCAGCCGGTTGTGGATTTACCGGAAACTAAAGCCTGGGCTGAAAAGCTGACCGCCATGCTGGCCAA CCGTAAATAAGGAGTAACCG
Downstream 100 bases:
>100_bases AAAAAAGGCCAGTCTGTCGACTGGCCTTTTTTTGACAAGGGTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTG CGTCTGCAGAATTTCGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: PAD; 4-hydroxybenzoate decarboxylase subunit D; 4-hydroxybenzoate DC; Phenylacrylic acid decarboxylase subunit D; Vanillate decarboxylase subunit D [H]
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MICPRCADAHIELMATSPVKGVWTVYQCQHCLYTWRDTEPLRRTSREHYPQAFRMTQKDIDDAPMVPSIPPLLAEDKR
Sequences:
>Translated_78_residues MICPRCADAHIELMATSPVKGVWTVYQCQHCLYTWRDTEPLRRTSREHYPQAFRMTQKDIDDAPMVPSIPPLLAEDKR >Mature_78_residues MICPRCADAHIELMATSPVKGVWTVYQCQHCLYTWRDTEPLRRTSREHYPQAFRMTQKDIDDAPMVPSIPPLLAEDKR
Specific function: Part of the BsdBCD complex involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate, vanillate and salicylate. Is not
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =4.1.1.61 [H]
Molecular weight: Translated: 9117; Mature: 9117
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 10.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICPRCADAHIELMATSPVKGVWTVYQCQHCLYTWRDTEPLRRTSREHYPQAFRMTQKDI CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHCCHHCCHHHHHHHHHCC DDAPMVPSIPPLLAEDKR CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MICPRCADAHIELMATSPVKGVWTVYQCQHCLYTWRDTEPLRRTSREHYPQAFRMTQKDI CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHCCHHCCHHHHHHHHHCC DDAPMVPSIPPLLAEDKR CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377 [H]