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The map label for this gene is ygbL [H]

Identifier: 29143174

GI number: 29143174

Start: 2895138

End: 2895776

Strand: Reverse

Name: ygbL [H]

Synonym: t2817

Alternate gene names: 29143174

Gene position: 2895776-2895138 (Counterclockwise)

Preceding gene: 29143176

Following gene: 29143173

Centisome position: 60.43

GC content: 55.87

Gene sequence:

>639_bases
ATGACGATACTGGCAAAAGAAGAGCACGCTTTGCGAGAAGAGATGGTCAGGATAGCCGCCTCGTTTTTCCAGCGCGGCTA
TGCCACCGGCTCGGCAGGCAACCTCTCGCTGTTACTGCCGGACGGCAATATTCTGGCGACGCCCACCGGTTCGTGTCTGG
GTAATCTCGACCCGCAGCGGCTATCCAAAGTGGACCCGCAAGGCGAATGGCTCAGCGGCGATAAACCGTCTAAAGAGGTG
CGTTTTCATCTGGCGTTGTATCGCAATAACCCTTGCTGCAAGGCCGTGGTACATCTGCACAGCACCTGGTCAACGGCGCT
TTCCTGTCTCGAAGGGCTGGACCCGCAAAATGTGATTCGCCCGTTTACCCCCTATGTGGTGATGCGGATGGGAGACATTC
CGCTGGTTCCCTACTATCGCCCGGGGGATGACCGAATTGCTCGCGATTTGGCTGCGCTGGCGGCCCGGCATCAGGCCTTT
TTACTGGCTAATCATGGGCCGGTCGTGTGCGGGGAGAATTTGCAGGAAGCCGCTAATAATACCGAGGAGCTGGAAGAGAC
GGCAAAGCTGATTTTTATCCTTGGCGAACGCCCGATTCGTTATTTAACCACCGAAGAAATTGCGCAGTTAAGGAGATAA

Upstream 100 bases:

>100_bases
CGTGGGTCAACGCGCTCCATGCGCCAGTCTCGCTGGCGCTAAAGTCAGGTAATTTTGGCGATGAATCCTTTTTCATCCGC
GCTCAAAGGGAGTTTCAGGT

Downstream 100 bases:

>100_bases
CCCGATGCCGCGTTTTGCCGCCGATTTGTCGATGATGTTTACCGAAGTGCCGTTTATCGAGCGTTTTGCCGCTGCTGCCG
AAGCCGGTTTTCAGGCCGTT

Product: aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTILAKEEHALREEMVRIAASFFQRGYATGSAGNLSLLLPDGNILATPTGSCLGNLDPQRLSKVDPQGEWLSGDKPSKEV
RFHLALYRNNPCCKAVVHLHSTWSTALSCLEGLDPQNVIRPFTPYVVMRMGDIPLVPYYRPGDDRIARDLAALAARHQAF
LLANHGPVVCGENLQEAANNTEELEETAKLIFILGERPIRYLTTEEIAQLRR

Sequences:

>Translated_212_residues
MTILAKEEHALREEMVRIAASFFQRGYATGSAGNLSLLLPDGNILATPTGSCLGNLDPQRLSKVDPQGEWLSGDKPSKEV
RFHLALYRNNPCCKAVVHLHSTWSTALSCLEGLDPQNVIRPFTPYVVMRMGDIPLVPYYRPGDDRIARDLAALAARHQAF
LLANHGPVVCGENLQEAANNTEELEETAKLIFILGERPIRYLTTEEIAQLRR
>Mature_211_residues
TILAKEEHALREEMVRIAASFFQRGYATGSAGNLSLLLPDGNILATPTGSCLGNLDPQRLSKVDPQGEWLSGDKPSKEVR
FHLALYRNNPCCKAVVHLHSTWSTALSCLEGLDPQNVIRPFTPYVVMRMGDIPLVPYYRPGDDRIARDLAALAARHQAFL
LANHGPVVCGENLQEAANNTEELEETAKLIFILGERPIRYLTTEEIAQLRR

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=211, Percent_Identity=85.781990521327, Blast_Score=377, Evalue=1e-106,
Organism=Escherichia coli, GI1789164, Length=206, Percent_Identity=32.0388349514563, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 23548; Mature: 23417

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILAKEEHALREEMVRIAASFFQRGYATGSAGNLSLLLPDGNILATPTGSCLGNLDPQR
CCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEECCCCCHHCCCCHHH
LSKVDPQGEWLSGDKPSKEVRFHLALYRNNPCCKAVVHLHSTWSTALSCLEGLDPQNVIR
HHCCCCCCCCCCCCCCCHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
PFTPYVVMRMGDIPLVPYYRPGDDRIARDLAALAARHQAFLLANHGPVVCGENLQEAANN
CCCCEEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHEEEEECCCCEEECCCHHHHHCC
TEELEETAKLIFILGERPIRYLTTEEIAQLRR
HHHHHHHHHEEEEECCCCCEEECHHHHHHHCC
>Mature Secondary Structure 
TILAKEEHALREEMVRIAASFFQRGYATGSAGNLSLLLPDGNILATPTGSCLGNLDPQR
CEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEECCCCCHHCCCCHHH
LSKVDPQGEWLSGDKPSKEVRFHLALYRNNPCCKAVVHLHSTWSTALSCLEGLDPQNVIR
HHCCCCCCCCCCCCCCCHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
PFTPYVVMRMGDIPLVPYYRPGDDRIARDLAALAARHQAFLLANHGPVVCGENLQEAANN
CCCCEEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHEEEEECCCCEEECCCHHHHHCC
TEELEETAKLIFILGERPIRYLTTEEIAQLRR
HHHHHHHHHEEEEECCCCCEEECHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240; 9278503 [H]