Click here to switch to the map view.

The map label for this gene is 29143166

Identifier: 29143166

GI number: 29143166

Start: 2886117

End: 2886443

Strand: Reverse

Name: 29143166

Synonym: t2809

Alternate gene names: NA

Gene position: 2886443-2886117 (Counterclockwise)

Preceding gene: 29143168

Following gene: 29143165

Centisome position: 60.24

GC content: 41.59

Gene sequence:

>327_bases
TTGAAAACAACTCTCAGCCAGCCTTTCATTATCAACAAGTTAAGTATCAATGTTAAGTCTGCGCTCAGTCGCTCTGGAAA
AATCGTTTTCGAAGCTAACCCAGCTCAAAAACTCTACATTGTTTTCGATGACCACAGACAAGCTCCTGCTGGTTTCGGGG
TAAAAGCCAGTTTGACGAAAAAAACCTACGTAATCCAGCGAAGAGTAGCCTCGTCAGATCGTAATGTCAGTGAGGGTAGG
AAGCCAAGTTCTGTCTTGAAAGTAAAAGTTGAAAATGTGTTCGATTTTCCAAATATTGACGAAACAAGGCAATCTGCAGG
CAATTAG

Upstream 100 bases:

>100_bases
CTATAAACTCACATAAACCCATAAATTTGTAGCTCATCTGTAGCCTAAAATGTGACAGGTTACATTCTCATCATTCCTGG
ACTACAACAGGGGTGATACT

Downstream 100 bases:

>100_bases
TTCAGACCATGTTCGCAACAAAGAGAAATCACAACAAAATTAAGAGGGAAACGGATGCTTCCGAACTCAAGACCGTAATC
AAGATTGTGTTGCATGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase; Cytoplasmic Protein; Integrase/Recombinase; Integrase Family Protein

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MKTTLSQPFIINKLSINVKSALSRSGKIVFEANPAQKLYIVFDDHRQAPAGFGVKASLTKKTYVIQRRVASSDRNVSEGR
KPSSVLKVKVENVFDFPNIDETRQSAGN

Sequences:

>Translated_108_residues
MKTTLSQPFIINKLSINVKSALSRSGKIVFEANPAQKLYIVFDDHRQAPAGFGVKASLTKKTYVIQRRVASSDRNVSEGR
KPSSVLKVKVENVFDFPNIDETRQSAGN
>Mature_108_residues
MKTTLSQPFIINKLSINVKSALSRSGKIVFEANPAQKLYIVFDDHRQAPAGFGVKASLTKKTYVIQRRVASSDRNVSEGR
KPSSVLKVKVENVFDFPNIDETRQSAGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11982; Mature: 11982

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTLSQPFIINKLSINVKSALSRSGKIVFEANPAQKLYIVFDDHRQAPAGFGVKASLTK
CCCCCCCCEEEEEEEECHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCCCCCEEEECCH
KTYVIQRRVASSDRNVSEGRKPSSVLKVKVENVFDFPNIDETRQSAGN
HHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCC
>Mature Secondary Structure
MKTTLSQPFIINKLSINVKSALSRSGKIVFEANPAQKLYIVFDDHRQAPAGFGVKASLTK
CCCCCCCCEEEEEEEECHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCCCCCEEEECCH
KTYVIQRRVASSDRNVSEGRKPSSVLKVKVENVFDFPNIDETRQSAGN
HHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA