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The map label for this gene is prgK [H]

Identifier: 29143132

GI number: 29143132

Start: 2852867

End: 2853625

Strand: Reverse

Name: prgK [H]

Synonym: t2773

Alternate gene names: 29143132

Gene position: 2853625-2852867 (Counterclockwise)

Preceding gene: 29143133

Following gene: 29143131

Centisome position: 59.55

GC content: 45.98

Gene sequence:

>759_bases
ATGATTCGTCGATATCTATATACCTTTCTGCTGGTAATGACCCTTGCCGGCTGTAAGGATAAGGATCTTTTAAAAGGACT
GGACCAGGAACAGGCTAATGAGGTCATTGCCGTTCTGCAAATGCACAATATAGAGGCGAATAAAATTGATAGCGGAAAAT
TGGGCTATAGCATTACCGTTGCTGAGCCTGATTTTACCGCTGCGGTGTACTGGATTAAAACTTATCAGCTTCCTCCCCGG
CCACGGGTGGAAATAGCGCAGATGTTCCCGGCGGATTCGCTGGTATCGTCTCCGCGAGCTGAAAAGGCCAGGTTATATTC
GGCTATTGAACAGCGACTGGAACAGTCATTACAGACGATGGAGGGCGTGCTCTCCGCCAGGGTCCATATTAGTTATGATA
TTGATGCTGGTGAAAATGGCCGTCCGCCAAAACCTGTTCATCTGTCGGCATTAGCCGTATATGAACGAGGTTCGCCGCTT
GCGCATCAGATCAGCGATATCAAGCGTTTCTTAAAGAATAGTTTTGCCGATGTGGATTATGACAACATTTCTGTTGTGTT
GTCAGAACGTTCTGATGCCCAATTACAGGCTCCCGGCACACCAGTAAAACGTAATTCTTTTGCAACCAGTTGGATTGTGT
TGATTATTTTGTTATCCGTGATGTCAGCAGGCTCTGGCGTCTGGTATTACAAAAACCATTATGCCCGCAATAAGAAAGGC
ATAACGGCTGATGATAAGGCGAAATCGTCAAATGAATAG

Upstream 100 bases:

>100_bases
CTATTTCGCAAGAGATGATTTCAGATTATAACCTGTATGTTTCTATGGTAAGTACCCTTACTCGTAAAGGAGTCGGGGCT
GTTGAAACGCTATTACGCTC

Downstream 100 bases:

>100_bases
GCAGCCATTACCCATTATCTGGCAAAGAATCATTTTTGATCCGTTATCGTATATCCATCCTCAGCGGTTGCAGATAGCGC
CGGAAATGATTGTCAGACCC

Product: pathogenicity island 1 effector protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MIRRYLYTFLLVMTLAGCKDKDLLKGLDQEQANEVIAVLQMHNIEANKIDSGKLGYSITVAEPDFTAAVYWIKTYQLPPR
PRVEIAQMFPADSLVSSPRAEKARLYSAIEQRLEQSLQTMEGVLSARVHISYDIDAGENGRPPKPVHLSALAVYERGSPL
AHQISDIKRFLKNSFADVDYDNISVVLSERSDAQLQAPGTPVKRNSFATSWIVLIILLSVMSAGSGVWYYKNHYARNKKG
ITADDKAKSSNE

Sequences:

>Translated_252_residues
MIRRYLYTFLLVMTLAGCKDKDLLKGLDQEQANEVIAVLQMHNIEANKIDSGKLGYSITVAEPDFTAAVYWIKTYQLPPR
PRVEIAQMFPADSLVSSPRAEKARLYSAIEQRLEQSLQTMEGVLSARVHISYDIDAGENGRPPKPVHLSALAVYERGSPL
AHQISDIKRFLKNSFADVDYDNISVVLSERSDAQLQAPGTPVKRNSFATSWIVLIILLSVMSAGSGVWYYKNHYARNKKG
ITADDKAKSSNE
>Mature_252_residues
MIRRYLYTFLLVMTLAGCKDKDLLKGLDQEQANEVIAVLQMHNIEANKIDSGKLGYSITVAEPDFTAAVYWIKTYQLPPR
PRVEIAQMFPADSLVSSPRAEKARLYSAIEQRLEQSLQTMEGVLSARVHISYDIDAGENGRPPKPVHLSALAVYERGSPL
AHQISDIKRFLKNSFADVDYDNISVVLSERSDAQLQAPGTPVKRNSFATSWIVLIILLSVMSAGSGVWYYKNHYARNKKG
ITADDKAKSSNE

Specific function: Required for invasion of epithelial cells. Could be involved in protein secretion [H]

COG id: COG4669

COG function: function code U; Type III secretory pathway, lipoprotein EscJ

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yscJ lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003282
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF [H]

EC number: NA

Molecular weight: Translated: 28150; Mature: 28150

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRYLYTFLLVMTLAGCKDKDLLKGLDQEQANEVIAVLQMHNIEANKIDSGKLGYSITV
CHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
AEPDFTAAVYWIKTYQLPPRPRVEIAQMFPADSLVSSPRAEKARLYSAIEQRLEQSLQTM
ECCCCCEEEEEEEEECCCCCCCHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
EGVLSARVHISYDIDAGENGRPPKPVHLSALAVYERGSPLAHQISDIKRFLKNSFADVDY
HHHHHEEEEEEEECCCCCCCCCCCCEEEHEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC
DNISVVLSERSDAQLQAPGTPVKRNSFATSWIVLIILLSVMSAGSGVWYYKNHYARNKKG
CCEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
ITADDKAKSSNE
CCCCCCCCCCCC
>Mature Secondary Structure
MIRRYLYTFLLVMTLAGCKDKDLLKGLDQEQANEVIAVLQMHNIEANKIDSGKLGYSITV
CHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
AEPDFTAAVYWIKTYQLPPRPRVEIAQMFPADSLVSSPRAEKARLYSAIEQRLEQSLQTM
ECCCCCEEEEEEEEECCCCCCCHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
EGVLSARVHISYDIDAGENGRPPKPVHLSALAVYERGSPLAHQISDIKRFLKNSFADVDY
HHHHHEEEEEEEECCCCCCCCCCCCEEEHEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC
DNISVVLSERSDAQLQAPGTPVKRNSFATSWIVLIILLSVMSAGSGVWYYKNHYARNKKG
CCEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
ITADDKAKSSNE
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7476203; 11677609 [H]