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The map label for this gene is 29143077

Identifier: 29143077

GI number: 29143077

Start: 2803306

End: 2804676

Strand: Reverse

Name: 29143077

Synonym: t2713

Alternate gene names: NA

Gene position: 2804676-2803306 (Counterclockwise)

Preceding gene: 29143078

Following gene: 29143063

Centisome position: 58.53

GC content: 47.41

Gene sequence:

>1371_bases
ATGAAGGCTAAATATTTGGCGCTGATGATCGGTGCTTGCTTTTCTCATAACCTTTGGGCAGCGAATGATATCACTATTGA
GCAGCGTCTGGCTGAACTGGAGCAACGTGTTGTTAATGCTGAAAAACGGGCATCCGATGCCGAGGCGCAAATTCGCTCGC
TGAAACAGCAGCAGGTCGCCGCTACACCGACGGTGAATGTCCAGTCCGCCGAGCCCATTGCAGCAGATAAAACGCCGCCG
AAGCTGACCTTATCCGGATTCAGCGATATTAAGTTCTATGGCGATGTCGAATTTAATATGGATGCGGCAAGCCGTTCCGG
TAGCCTGACCTCGATGAGAACGTCAGCGAATAAAGATTGGGCATCAGGAACCAATGAACGCTGGGATATTAACGGGCGCC
TGTTGCTGGGCTTTGATGGCTACCAGCGGCTGGACAACGGTAATTTTGCCGGATTCTCTGTACAGCCTCTGGCGGATCTG
ACCGGGAAAATGAACCTTGATGATGCCGTTTTCTTCTTTGGTCGTGAGAATGACTGGAAAATTAAGGTTGGTCGTTTTGA
AGCCTACGATATGTTCCCGCTGAATCAGGATACATTTATTGAATATTCGGGGAATACAGCGAACGATCTTTACAGTGACG
GTTACGGCTATATCTATATGATGAAAGAAGGACGGGGACGTAGCGACAGTGGGGGTAACTTCCTGCTGAGCAAAACCATC
GACAACTGGTATTTCGAAGTTAACACATTGCTGGAAAATGGCAGTACGTTATATACCGAGAAGCAGTACCACGGAATGGA
TTTAACCAACGATAAAAACGTGGCTTACGTCCGTCCGGTTATTGCCTGGCAAAACGGGCGTTTTTCAACGGCGATAGCGA
TGGAAAGTAACGTCGTTAACAACGCCTATGGCTATTATGAGAATGGGAAGTGGATCGATCAGTCAGATCGTACGGGCTAT
GGTTTTACCATGACCTGGAATGGTCAAAAAACTGACCCGGAAGATGGCGCAGTTATTAACCTGAATACCGCTTATATGGA
TGCGACCGATGAGACAGATTTTACCGCTGGGGTGAATGCGCTGTGGCATCGATTTGAACTGGGTTATATCTATGCGCATA
ACAAAATCGAAGCCTTTAATGCTACCAATATCGATGCCGTTTGTGAGGACGATTGCTGGATCACCGATCCCGGCAATTAT
GACATCCACACTATTCATGCCTCATATTTATTCCCCAACGTGATGGATATGAAAAACTTTAACATCTACCTCGGCGCCTA
TGCTTCATGGGTAGAGGCCAATCCGAATAATGGCGATAACAGTGAAGATGCGCGTTACGGCGGGCGTCTGAGATTCAAAT
ATTTCTTCTGA

Upstream 100 bases:

>100_bases
TGCGCCAGATATCCAGGTAATAACAAGACTCTACTAATAGCCGGTCGATGGGGTTTTTAGCAAATCTTATCTGGTATACA
TCAAACTTAAGGGATAAAAA

Downstream 100 bases:

>100_bases
TTGTTGGTCTACTAAAAAAGGGATCCGTAGATCCCTTTTATCAGATAGTTAGTGCGCGCCACCGCCGCCGCCGCCCGCAC
CGAAGGGCGGTTTGGCGAAC

Product: glycoporin

Products: NA

Alternate protein names: Glycoporin RafY; Glycoporin RfaY

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MKAKYLALMIGACFSHNLWAANDITIEQRLAELEQRVVNAEKRASDAEAQIRSLKQQQVAATPTVNVQSAEPIAADKTPP
KLTLSGFSDIKFYGDVEFNMDAASRSGSLTSMRTSANKDWASGTNERWDINGRLLLGFDGYQRLDNGNFAGFSVQPLADL
TGKMNLDDAVFFFGRENDWKIKVGRFEAYDMFPLNQDTFIEYSGNTANDLYSDGYGYIYMMKEGRGRSDSGGNFLLSKTI
DNWYFEVNTLLENGSTLYTEKQYHGMDLTNDKNVAYVRPVIAWQNGRFSTAIAMESNVVNNAYGYYENGKWIDQSDRTGY
GFTMTWNGQKTDPEDGAVINLNTAYMDATDETDFTAGVNALWHRFELGYIYAHNKIEAFNATNIDAVCEDDCWITDPGNY
DIHTIHASYLFPNVMDMKNFNIYLGAYASWVEANPNNGDNSEDARYGGRLRFKYFF

Sequences:

>Translated_456_residues
MKAKYLALMIGACFSHNLWAANDITIEQRLAELEQRVVNAEKRASDAEAQIRSLKQQQVAATPTVNVQSAEPIAADKTPP
KLTLSGFSDIKFYGDVEFNMDAASRSGSLTSMRTSANKDWASGTNERWDINGRLLLGFDGYQRLDNGNFAGFSVQPLADL
TGKMNLDDAVFFFGRENDWKIKVGRFEAYDMFPLNQDTFIEYSGNTANDLYSDGYGYIYMMKEGRGRSDSGGNFLLSKTI
DNWYFEVNTLLENGSTLYTEKQYHGMDLTNDKNVAYVRPVIAWQNGRFSTAIAMESNVVNNAYGYYENGKWIDQSDRTGY
GFTMTWNGQKTDPEDGAVINLNTAYMDATDETDFTAGVNALWHRFELGYIYAHNKIEAFNATNIDAVCEDDCWITDPGNY
DIHTIHASYLFPNVMDMKNFNIYLGAYASWVEANPNNGDNSEDARYGGRLRFKYFF
>Mature_456_residues
MKAKYLALMIGACFSHNLWAANDITIEQRLAELEQRVVNAEKRASDAEAQIRSLKQQQVAATPTVNVQSAEPIAADKTPP
KLTLSGFSDIKFYGDVEFNMDAASRSGSLTSMRTSANKDWASGTNERWDINGRLLLGFDGYQRLDNGNFAGFSVQPLADL
TGKMNLDDAVFFFGRENDWKIKVGRFEAYDMFPLNQDTFIEYSGNTANDLYSDGYGYIYMMKEGRGRSDSGGNFLLSKTI
DNWYFEVNTLLENGSTLYTEKQYHGMDLTNDKNVAYVRPVIAWQNGRFSTAIAMESNVVNNAYGYYENGKWIDQSDRTGY
GFTMTWNGQKTDPEDGAVINLNTAYMDATDETDFTAGVNALWHRFELGYIYAHNKIEAFNATNIDAVCEDDCWITDPGNY
DIHTIHASYLFPNVMDMKNFNIYLGAYASWVEANPNNGDNSEDARYGGRLRFKYFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51527; Mature: 51527

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKYLALMIGACFSHNLWAANDITIEQRLAELEQRVVNAEKRASDAEAQIRSLKQQQVA
CCCCEEEEEEHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
ATPTVNVQSAEPIAADKTPPKLTLSGFSDIKFYGDVEFNMDAASRSGSLTSMRTSANKDW
CCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCC
ASGTNERWDINGRLLLGFDGYQRLDNGNFAGFSVQPLADLTGKMNLDDAVFFFGRENDWK
CCCCCCEEECCCEEEEEECCHHHCCCCCCCCEEECCHHHCCCCCCCCCEEEEEECCCCEE
IKVGRFEAYDMFPLNQDTFIEYSGNTANDLYSDGYGYIYMMKEGRGRSDSGGNFLLSKTI
EEEEEEEEEEECCCCCCCEEEECCCCCCHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEC
DNWYFEVNTLLENGSTLYTEKQYHGMDLTNDKNVAYVRPVIAWQNGRFSTAIAMESNVVN
CCEEEEEEEHCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCC
NAYGYYENGKWIDQSDRTGYGFTMTWNGQKTDPEDGAVINLNTAYMDATDETDFTAGVNA
CCCCEECCCCEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHH
LWHRFELGYIYAHNKIEAFNATNIDAVCEDDCWITDPGNYDIHTIHASYLFPNVMDMKNF
HHHEEEEEEEEECCEEEEECCCCCCEEECCCCEEECCCCCEEEEEEEHHHCCCCCCCCCC
NIYLGAYASWVEANPNNGDNSEDARYGGRLRFKYFF
EEEEEEEEEEEECCCCCCCCCCCHHCCCEEEEEEEC
>Mature Secondary Structure
MKAKYLALMIGACFSHNLWAANDITIEQRLAELEQRVVNAEKRASDAEAQIRSLKQQQVA
CCCCEEEEEEHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
ATPTVNVQSAEPIAADKTPPKLTLSGFSDIKFYGDVEFNMDAASRSGSLTSMRTSANKDW
CCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCC
ASGTNERWDINGRLLLGFDGYQRLDNGNFAGFSVQPLADLTGKMNLDDAVFFFGRENDWK
CCCCCCEEECCCEEEEEECCHHHCCCCCCCCEEECCHHHCCCCCCCCCEEEEEECCCCEE
IKVGRFEAYDMFPLNQDTFIEYSGNTANDLYSDGYGYIYMMKEGRGRSDSGGNFLLSKTI
EEEEEEEEEEECCCCCCCEEEECCCCCCHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEC
DNWYFEVNTLLENGSTLYTEKQYHGMDLTNDKNVAYVRPVIAWQNGRFSTAIAMESNVVN
CCEEEEEEEHCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCC
NAYGYYENGKWIDQSDRTGYGFTMTWNGQKTDPEDGAVINLNTAYMDATDETDFTAGVNA
CCCCEECCCCEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHH
LWHRFELGYIYAHNKIEAFNATNIDAVCEDDCWITDPGNYDIHTIHASYLFPNVMDMKNF
HHHEEEEEEEEECCEEEEECCCCCCEEECCCCEEECCCCCEEEEEEEHHHCCCCCCCCCC
NIYLGAYASWVEANPNNGDNSEDARYGGRLRFKYFF
EEEEEEEEEEEECCCCCCCCCCCHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA