| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is nrdI [H]
Identifier: 29143068
GI number: 29143068
Start: 2790852
End: 2791262
Strand: Direct
Name: nrdI [H]
Synonym: t2703
Alternate gene names: 29143068
Gene position: 2790852-2791262 (Clockwise)
Preceding gene: 29143067
Following gene: 29143069
Centisome position: 58.24
GC content: 57.42
Gene sequence:
>411_bases ATGAGCGCGCTCGTCTACTTCTCCAGCAGCTCTGAAAATACGCACCGTTTTATGCAGCGTCTGGGGCTGCCCGCCACGCG TATTCCGCTCAATGAACGGGAGCGAATTCAGGTAGACGAACCGTACATTCTGGTTGTGCCGTCATACGGCGGCGGCGGGA TGGCCGGTGCGGTGCCGCGACAGGTGATCCGCTTTTTAAATGATGAACACAACCGGGCGCGCATTCGCGGCGTCATCGCC TCCGGTAACCGCAATTTCGGCGATGCCTGGGGATGCGCTGGCGATGTGATAGCACAAAAATGCGGCGTCCCCTGGCTGTA CCGCTTTGAGCTCATGGGCACACAACGCGACATCGATAACGTCCGAAAAGGAGTAAATGAATTTTGGCAACAATCACCCC GGAGCGCGTAA
Upstream 100 bases:
>100_bases TTCGTCAATTACCGGTGGTGATGGCGGGCGATTTGAGCTGGTCTGGCTTCCGTCCGGACATGATTAACCGTCTGCCCCCG ACGCCCCACGCGGCAAACGC
Downstream 100 bases:
>100_bases TGCAGGAAACCATGGATTACCACGCCCTGAACGCGATGCTGAATCTTTACGATAAAGCAGGCCATATTCAGTTCGACAAG GACCAGCAGGCGATCGACGC
Product: ribonucleotide reductase stimulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSALVYFSSSSENTHRFMQRLGLPATRIPLNERERIQVDEPYILVVPSYGGGGMAGAVPRQVIRFLNDEHNRARIRGVIA SGNRNFGDAWGCAGDVIAQKCGVPWLYRFELMGTQRDIDNVRKGVNEFWQQSPRSA
Sequences:
>Translated_136_residues MSALVYFSSSSENTHRFMQRLGLPATRIPLNERERIQVDEPYILVVPSYGGGGMAGAVPRQVIRFLNDEHNRARIRGVIA SGNRNFGDAWGCAGDVIAQKCGVPWLYRFELMGTQRDIDNVRKGVNEFWQQSPRSA >Mature_135_residues SALVYFSSSSENTHRFMQRLGLPATRIPLNERERIQVDEPYILVVPSYGGGGMAGAVPRQVIRFLNDEHNRARIRGVIAS GNRNFGDAWGCAGDVIAQKCGVPWLYRFELMGTQRDIDNVRKGVNEFWQQSPRSA
Specific function: Probably involved in ribonucleotide reductase function [H]
COG id: COG1780
COG function: function code F; Protein involved in ribonucleotide reduction
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nrdI family [H]
Homologues:
Organism=Escherichia coli, GI1789029, Length=136, Percent_Identity=85.2941176470588, Blast_Score=244, Evalue=1e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020852 - InterPro: IPR004465 [H]
Pfam domain/function: PF07972 Flavodoxin_NdrI [H]
EC number: NA
Molecular weight: Translated: 15299; Mature: 15167
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALVYFSSSSENTHRFMQRLGLPATRIPLNERERIQVDEPYILVVPSYGGGGMAGAVPR CCEEEEEECCCCHHHHHHHHHCCCCEECCCCCCCEEEECCCEEEEEECCCCCCCCHHHHH QVIRFLNDEHNRARIRGVIASGNRNFGDAWGCAGDVIAQKCGVPWLYRFELMGTQRDIDN HHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHH VRKGVNEFWQQSPRSA HHHHHHHHHHCCCCCC >Mature Secondary Structure SALVYFSSSSENTHRFMQRLGLPATRIPLNERERIQVDEPYILVVPSYGGGGMAGAVPR CEEEEEECCCCHHHHHHHHHCCCCEECCCCCCCEEEECCCEEEEEECCCCCCCCHHHHH QVIRFLNDEHNRARIRGVIASGNRNFGDAWGCAGDVIAQKCGVPWLYRFELMGTQRDIDN HHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHH VRKGVNEFWQQSPRSA HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA