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The map label for this gene is ygaM [H]

Identifier: 29143064

GI number: 29143064

Start: 2788074

End: 2788400

Strand: Direct

Name: ygaM [H]

Synonym: t2698

Alternate gene names: 29143064

Gene position: 2788074-2788400 (Clockwise)

Preceding gene: 29143062

Following gene: 29143065

Centisome position: 58.18

GC content: 55.05

Gene sequence:

>327_bases
ATGCTTAACAAACCGAACCGAAACGACGTCGATGATGGTGTTCAGGATATTCAGAATGATGTCAATCGATTAGCCGACAG
TCTGGAAGATGTCCTTAAATCCTGGGGAAGCGATGCGAAAGACGAAGCCGAGGCTGCGCGACGTAAAGCACAGGCGTTGC
TGAAAGAGACCCGGGCGCGGATGCAGGGTCGTACTCGCGTAAAACAAGCCGCCTGTGATGCGATGGGGTGCGCGGATACG
TTTGTGCGTGAAAAACCCTGGTGTAGCGTAGGAACCGCCGCAGCGGTGGGGATTTTTATCGGGGCGCTGCTTAGCCTGCG
TCGCTAA

Upstream 100 bases:

>100_bases
TTCAGAAAAGTCCAGAAACGCATGATATCGCCGTAACAAGCCTCAGCAGGTAAAAATATGAACTACACTGAAAGCTACAT
CGAAATCAATGGAGGATCAT

Downstream 100 bases:

>100_bases
CGACGTGCGCTGCCGGATGGCGACATACTTTATGGGGCCTGCATCATTGCCGCAGGCCCAGGTCGCGCCATTCGGCGAAA
CGGTTACTGTATCGCCTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MLNKPNRNDVDDGVQDIQNDVNRLADSLEDVLKSWGSDAKDEAEAARRKAQALLKETRARMQGRTRVKQAACDAMGCADT
FVREKPWCSVGTAAAVGIFIGALLSLRR

Sequences:

>Translated_108_residues
MLNKPNRNDVDDGVQDIQNDVNRLADSLEDVLKSWGSDAKDEAEAARRKAQALLKETRARMQGRTRVKQAACDAMGCADT
FVREKPWCSVGTAAAVGIFIGALLSLRR
>Mature_108_residues
MLNKPNRNDVDDGVQDIQNDVNRLADSLEDVLKSWGSDAKDEAEAARRKAQALLKETRARMQGRTRVKQAACDAMGCADT
FVREKPWCSVGTAAAVGIFIGALLSLRR

Specific function: Unknown

COG id: COG4575

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli elaB and yqjD [H]

Homologues:

Organism=Escherichia coli, GI1789027, Length=108, Percent_Identity=87.037037037037, Blast_Score=194, Evalue=9e-52,
Organism=Escherichia coli, GI1789485, Length=99, Percent_Identity=38.3838383838384, Blast_Score=69, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010279 [H]

Pfam domain/function: PF05957 DUF883 [H]

EC number: NA

Molecular weight: Translated: 11848; Mature: 11848

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKPNRNDVDDGVQDIQNDVNRLADSLEDVLKSWGSDAKDEAEAARRKAQALLKETRAR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
MQGRTRVKQAACDAMGCADTFVREKPWCSVGTAAAVGIFIGALLSLRR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNKPNRNDVDDGVQDIQNDVNRLADSLEDVLKSWGSDAKDEAEAARRKAQALLKETRAR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
MQGRTRVKQAACDAMGCADTFVREKPWCSVGTAAAVGIFIGALLSLRR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]