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The map label for this gene is safA

Identifier: 29142939

GI number: 29142939

Start: 2638950

End: 2639444

Strand: Reverse

Name: safA

Synonym: t2561

Alternate gene names: NA

Gene position: 2639444-2638950 (Counterclockwise)

Preceding gene: 29142941

Following gene: 29142938

Centisome position: 55.08

GC content: 41.41

Gene sequence:

>495_bases
ATGAAAAACATAAAAAAATTAATTATCGCAAGCGTGTTGAGCATGATAACTGCTAGTTGTTATGCTGGTTCAATCGTGGT
GGGCTCAGAGCAACAAAGTTCAGTGGATATTGGCTTTGCCTCTCCCCAGCAGTTGAGCGTAACATTTGCTCCAGTGGCGG
GCTTAAAGGCTGGGGTGATTAAGTCTAATACGGAGATTGCGACTATTGCAGTTAGTTCTGTTGCTGCTAAACAATTCGCG
ATCGCAGCGGATTTTAAGGCAAAGAATGTCATGAATGGCGATACATGGACTTTATATGGTAAAAATACTGGCAAAGGAAT
CAAAGTGTACTTCTATGGTGAGACAACCTCACCAAAGGGGAATGTAAATTACAATGGGCATCAGTGGATCATATATGATA
TTAACGACAAACTTGGTGTTAAACTAGCTGGAGATCAGAATGTCCCAGCTGATGTCTTCCCAATGACTGTAAACATAGCG
GCATATCAAGCTTAA

Upstream 100 bases:

>100_bases
TATTACCAGCCAGGGATTTTCCCATATGGTAAAATTTGTTATGACATCATAACATTCTGGACGTGCGATTTTAACTTAGT
TTTAAAGAGGTATTTTTTCA

Downstream 100 bases:

>100_bases
TAGTAAGCAACTTCTATTAAGTATTATTAAGTCTTAAAGTATTCCCAGCCACAGGCTTTTCTGTACGGTGAATTTTGGTA
TGACATTATTCATTCTTGAT

Product: lipoprotein

Products: NA

Alternate protein names: Spora Coat Assembly Protein SafA; Saf-Pilin Pilus Formation Protein; Outer Membrane Protein

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKNIKKLIIASVLSMITASCYAGSIVVGSEQQSSVDIGFASPQQLSVTFAPVAGLKAGVIKSNTEIATIAVSSVAAKQFA
IAADFKAKNVMNGDTWTLYGKNTGKGIKVYFYGETTSPKGNVNYNGHQWIIYDINDKLGVKLAGDQNVPADVFPMTVNIA
AYQA

Sequences:

>Translated_164_residues
MKNIKKLIIASVLSMITASCYAGSIVVGSEQQSSVDIGFASPQQLSVTFAPVAGLKAGVIKSNTEIATIAVSSVAAKQFA
IAADFKAKNVMNGDTWTLYGKNTGKGIKVYFYGETTSPKGNVNYNGHQWIIYDINDKLGVKLAGDQNVPADVFPMTVNIA
AYQA
>Mature_164_residues
MKNIKKLIIASVLSMITASCYAGSIVVGSEQQSSVDIGFASPQQLSVTFAPVAGLKAGVIKSNTEIATIAVSSVAAKQFA
IAADFKAKNVMNGDTWTLYGKNTGKGIKVYFYGETTSPKGNVNYNGHQWIIYDINDKLGVKLAGDQNVPADVFPMTVNIA
AYQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17373; Mature: 17373

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIKKLIIASVLSMITASCYAGSIVVGSEQQSSVDIGFASPQQLSVTFAPVAGLKAGVI
CCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCCCCEEEEEEECCCCCEECEE
KSNTEIATIAVSSVAAKQFAIAADFKAKNVMNGDTWTLYGKNTGKGIKVYFYGETTSPKG
ECCCEEEEEEEEHHHHHEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCC
NVNYNGHQWIIYDINDKLGVKLAGDQNVPADVFPMTVNIAAYQA
CCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEEEEEECC
>Mature Secondary Structure
MKNIKKLIIASVLSMITASCYAGSIVVGSEQQSSVDIGFASPQQLSVTFAPVAGLKAGVI
CCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCCCCEEEEEEECCCCCEECEE
KSNTEIATIAVSSVAAKQFAIAADFKAKNVMNGDTWTLYGKNTGKGIKVYFYGETTSPKG
ECCCEEEEEEEEHHHHHEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCC
NVNYNGHQWIIYDINDKLGVKLAGDQNVPADVFPMTVNIAAYQA
CCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA