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The map label for this gene is appB [H]

Identifier: 29142889

GI number: 29142889

Start: 2578361

End: 2579371

Strand: Reverse

Name: appB [H]

Synonym: t2503

Alternate gene names: 29142889

Gene position: 2579371-2578361 (Counterclockwise)

Preceding gene: 29142890

Following gene: 29142888

Centisome position: 53.83

GC content: 55.0

Gene sequence:

>1011_bases
ATGACCATCGATCTTCCGGTTATCTGGTTTGCTATTATCGTGTTCGCCACGCTGATGTATATCGTGATGGATGGTTTCGA
TCTGGGCGTCGGTATCCTGTTTCCGTTTATTCGTGATAAACACGATCGCGATGTTATGGTGAACTCGGTCGCGCCGGTAT
GGGACGGGAACGAAACCTGGCTAGTGCTGGGCGGGGCCGGGCTTTTTGGCGCGTTCCCGTTGGCTTATGCCGTCATCACC
GACGCGCTGACTATCCCGCTGGTGGTTATGCTGCTTGGTCTTATCTTTCGCGGCGTCGCTTTTGAATTCCGTTTTAAAGC
CACCGAGTCGCATCGCGCGTTCTGGGATAAATCCTTTATCGTCGGGTCAATCCTGGCGACCTTTGCCCAGGGGGTTGTGG
TGAGCGCGGTGGTGAGCGGTTTTCAGGTGGAAGGGCGAACCTTTAGCGGTTCGCAGCTTGACTGGCTGACGCCGTTTAAT
CTGTTCTGCGGCGTCGGTCTGGTCGTCACCTACGCGCTGCTGGGCGCTACCTGGCTGATTATGAAAAGCGAAGATCCGCT
GCATAGCCGGATGTGCGCGCTGTCGCGCCCGTTGTTGATCGTCTTGTTGCTGGTGATGGGGGGCGTCAGCGTGTGGACGC
CGCTCACCCATGACGACATCGCCGAGCGCTGGTTCACGCTGCCCAATTTATACTACTTCCTGCCGGTGCCTGTGCTGGTG
TTGGCTTTTAGCGTCTGGCTATGGCGCAGCGTGAAAAAACCACAATCCCATGCGCGTCCATTTATTCTCACGCTAGGGCT
GATTTTTCTGGGGTTCAGCGGGTTAGGAATCAGTATTTGGCCGAATATTATTCCACCGGATATTTCGCTGTATGCCGCCG
CCGCGCCGTCGCAAAGTCAAAGCTTTATGCTGGTTGGGGCGCTGATAATCATCCCGATTATTCTGGCTTATACCTTCTGG
AGCTACTACGTCTTCCGTGGAAAAGTGCGACATGGAGAGGGATATCACTGA

Upstream 100 bases:

>100_bases
AAGGGCCGCAGCCGGCGGAGACACCGACCGCTGAAACCGATGGCAGACCCGCGCGTCCTATCTCTGCCGTGGGAGAATCG
CTTGAGCAGGAGAAACGCGA

Downstream 100 bases:

>100_bases
TGGTTAAAGTGAAAAAATGGTCGCGGCGAGTCGTATGGATGGTCGCGATATGGTGCGCCAGCGTGCTTCTGCTGGCGGGC
GTCGGAATGTTGTTCAGACT

Product: terminal oxidase subunit II

Products: NA

Alternate protein names: Cytochrome bd-II oxidase subunit II [H]

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTIDLPVIWFAIIVFATLMYIVMDGFDLGVGILFPFIRDKHDRDVMVNSVAPVWDGNETWLVLGGAGLFGAFPLAYAVIT
DALTIPLVVMLLGLIFRGVAFEFRFKATESHRAFWDKSFIVGSILATFAQGVVVSAVVSGFQVEGRTFSGSQLDWLTPFN
LFCGVGLVVTYALLGATWLIMKSEDPLHSRMCALSRPLLIVLLLVMGGVSVWTPLTHDDIAERWFTLPNLYYFLPVPVLV
LAFSVWLWRSVKKPQSHARPFILTLGLIFLGFSGLGISIWPNIIPPDISLYAAAAPSQSQSFMLVGALIIIPIILAYTFW
SYYVFRGKVRHGEGYH

Sequences:

>Translated_336_residues
MTIDLPVIWFAIIVFATLMYIVMDGFDLGVGILFPFIRDKHDRDVMVNSVAPVWDGNETWLVLGGAGLFGAFPLAYAVIT
DALTIPLVVMLLGLIFRGVAFEFRFKATESHRAFWDKSFIVGSILATFAQGVVVSAVVSGFQVEGRTFSGSQLDWLTPFN
LFCGVGLVVTYALLGATWLIMKSEDPLHSRMCALSRPLLIVLLLVMGGVSVWTPLTHDDIAERWFTLPNLYYFLPVPVLV
LAFSVWLWRSVKKPQSHARPFILTLGLIFLGFSGLGISIWPNIIPPDISLYAAAAPSQSQSFMLVGALIIIPIILAYTFW
SYYVFRGKVRHGEGYH
>Mature_335_residues
TIDLPVIWFAIIVFATLMYIVMDGFDLGVGILFPFIRDKHDRDVMVNSVAPVWDGNETWLVLGGAGLFGAFPLAYAVITD
ALTIPLVVMLLGLIFRGVAFEFRFKATESHRAFWDKSFIVGSILATFAQGVVVSAVVSGFQVEGRTFSGSQLDWLTPFNL
FCGVGLVVTYALLGATWLIMKSEDPLHSRMCALSRPLLIVLLLVMGGVSVWTPLTHDDIAERWFTLPNLYYFLPVPVLVL
AFSVWLWRSVKKPQSHARPFILTLGLIFLGFSGLGISIWPNIIPPDISLYAAAAPSQSQSFMLVGALIIIPIILAYTFWS
YYVFRGKVRHGEGYH

Specific function: Cytochrome oxidase subunit [H]

COG id: COG1294

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli CydB [H]

Homologues:

Organism=Escherichia coli, GI1787213, Length=367, Percent_Identity=28.6103542234332, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1786954, Length=370, Percent_Identity=28.3783783783784, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003317 [H]

Pfam domain/function: PF02322 Cyto_ox_2 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 37316; Mature: 37184

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDLPVIWFAIIVFATLMYIVMDGFDLGVGILFPFIRDKHDRDVMVNSVAPVWDGNETW
CEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEE
LVLGGAGLFGAFPLAYAVITDALTIPLVVMLLGLIFRGVAFEFRFKATESHRAFWDKSFI
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHH
VGSILATFAQGVVVSAVVSGFQVEGRTFSGSQLDWLTPFNLFCGVGLVVTYALLGATWLI
HHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEE
MKSEDPLHSRMCALSRPLLIVLLLVMGGVSVWTPLTHDDIAERWFTLPNLYYFLPVPVLV
EECCCCHHHHHHHHCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
LAFSVWLWRSVKKPQSHARPFILTLGLIFLGFSGLGISIWPNIIPPDISLYAAAAPSQSQ
HHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEECCCCCCC
SFMLVGALIIIPIILAYTFWSYYVFRGKVRHGEGYH
HHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCC
>Mature Secondary Structure 
TIDLPVIWFAIIVFATLMYIVMDGFDLGVGILFPFIRDKHDRDVMVNSVAPVWDGNETW
EECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEE
LVLGGAGLFGAFPLAYAVITDALTIPLVVMLLGLIFRGVAFEFRFKATESHRAFWDKSFI
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHH
VGSILATFAQGVVVSAVVSGFQVEGRTFSGSQLDWLTPFNLFCGVGLVVTYALLGATWLI
HHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEE
MKSEDPLHSRMCALSRPLLIVLLLVMGGVSVWTPLTHDDIAERWFTLPNLYYFLPVPVLV
EECCCCHHHHHHHHCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
LAFSVWLWRSVKKPQSHARPFILTLGLIFLGFSGLGISIWPNIIPPDISLYAAAAPSQSQ
HHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEECCCCCCC
SFMLVGALIIIPIILAYTFWSYYVFRGKVRHGEGYH
HHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658595; 8905232; 9278503; 8626304 [H]