Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is yajF [H]
Identifier: 29142858
GI number: 29142858
Start: 2544731
End: 2545639
Strand: Reverse
Name: yajF [H]
Synonym: t2471
Alternate gene names: 29142858
Gene position: 2545639-2544731 (Counterclockwise)
Preceding gene: 29142860
Following gene: 29142855
Centisome position: 53.12
GC content: 57.76
Gene sequence:
>909_bases GTGCGTATTGGTATCGATTTAGGCGGCACAAAAACGGAAGTCATTGCGCTTGATGATGCAGGAGAGCAGCGGTTTCGCCA TCGTCTGCCTACGCCGCGGGAGGATTATCAGCAAACGATAGAAACCATCGCTACGCTGGTCGACATGGCGGAACAGGCGA CCGGCCAGACCGGTAGCGTTGGCATTGGCATTCCCGGTTCTCTCTCGCCTTACACCGGCGTGGTAAAAAACGCTAACTCT ACGTGGCTTAACGGCCAGCCGTTCGATAGCGATGTGAGCCGTCGTCTGAAGCGTGAAGTGCGGTTAGCCAACGATGCCAA TTGCCTGGCGGTATCAGAGGCGGTAGATGGCGCGGCGGCGGGGGCGCAAACGGTATTTGCGGTGATTATCGGTACCGGGT GCGGCGCGGGCGTAGCGCTAAATGGCCGGGCGCACATCGGCGGCAACGGTACGGCAGGCGAATGGGGCCACAATCCGTTG CCGTGGATGGATGACGATGAGTTGCGTTACCGCGAAGAAATTCCCTGTTATTGCGGTAAACAAGGCTGTATCGAAACCTT TATTTCCGGTACGGGATTCGCCACGGATTACCAGCGTTTGAGCGGTAAAACGCTAAAAGGCGATGAGATTATTCGTCTGG TCGACGCGCAGGACGCCGTGGCGGAACTGGCGATAAGCCGTTATGAGCTACGGCTGGCGAAGGCATTATCTCATGTCGTG AATATTCTGGATCCGGATGTCATTGTGCTGGGCGGCGGTATGAGCAATGTTGAGCGCCTGTACAAAACGGTTCCGTCGCT GATGAAATCGTTTGTTTTTGGCGGCGAGTGCGAGACGCCGGTACGTAAGGCGCGGCATGGCGATTCGAGCGGCGTGCGCG GCGCGGCCTGGCTGTGGCCGCTGGCGTAA
Upstream 100 bases:
>100_bases AATCCAGTCGGTATAGTAACGAATTGTCGGCAGGCTTGCATTGCCAATCAGAACGGTGAATTCTACCCTGTTGATATTCC CAAAAAATGAGGAGCGGTAT
Downstream 100 bases:
>100_bases CGTTTCTAGCCGGATGGCGTCATCCGGCAACCGGCGTGACCGATGGCTGCTTGTGTTTTAGACGTCCGTATACCAGCAAC GACGACATGGCGGAAAACGA
Product: fructokinase
Products: NA
Alternate protein names: D-fructose kinase; Manno(fructo)kinase [H]
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MRIGIDLGGTKTEVIALDDAGEQRFRHRLPTPREDYQQTIETIATLVDMAEQATGQTGSVGIGIPGSLSPYTGVVKNANS TWLNGQPFDSDVSRRLKREVRLANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVALNGRAHIGGNGTAGEWGHNPL PWMDDDELRYREEIPCYCGKQGCIETFISGTGFATDYQRLSGKTLKGDEIIRLVDAQDAVAELAISRYELRLAKALSHVV NILDPDVIVLGGGMSNVERLYKTVPSLMKSFVFGGECETPVRKARHGDSSGVRGAAWLWPLA
Sequences:
>Translated_302_residues MRIGIDLGGTKTEVIALDDAGEQRFRHRLPTPREDYQQTIETIATLVDMAEQATGQTGSVGIGIPGSLSPYTGVVKNANS TWLNGQPFDSDVSRRLKREVRLANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVALNGRAHIGGNGTAGEWGHNPL PWMDDDELRYREEIPCYCGKQGCIETFISGTGFATDYQRLSGKTLKGDEIIRLVDAQDAVAELAISRYELRLAKALSHVV NILDPDVIVLGGGMSNVERLYKTVPSLMKSFVFGGECETPVRKARHGDSSGVRGAAWLWPLA >Mature_302_residues MRIGIDLGGTKTEVIALDDAGEQRFRHRLPTPREDYQQTIETIATLVDMAEQATGQTGSVGIGIPGSLSPYTGVVKNANS TWLNGQPFDSDVSRRLKREVRLANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVALNGRAHIGGNGTAGEWGHNPL PWMDDDELRYREEIPCYCGKQGCIETFISGTGFATDYQRLSGKTLKGDEIIRLVDAQDAVAELAISRYELRLAKALSHVV NILDPDVIVLGGGMSNVERLYKTVPSLMKSFVFGGECETPVRKARHGDSSGVRGAAWLWPLA
Specific function: Catalyzes the phosphorylation of fructose to fructose-6- P. Has also low level glucokinase activity in vitro. Is not able to phosphorylate D-ribose, D-mannitol, D-sorbitol, inositol, and L-threonine [H]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Escherichia coli, GI87081733, Length=300, Percent_Identity=88, Blast_Score=553, Evalue=1e-159, Organism=Escherichia coli, GI1787363, Length=301, Percent_Identity=38.8704318936877, Blast_Score=204, Evalue=5e-54, Organism=Escherichia coli, GI1786891, Length=274, Percent_Identity=24.0875912408759, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1790522, Length=206, Percent_Identity=29.126213592233, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1787878, Length=216, Percent_Identity=26.3888888888889, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 32290; Mature: 32290
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS01125 ROK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGIDLGGTKTEVIALDDAGEQRFRHRLPTPREDYQQTIETIATLVDMAEQATGQTGSV CEEEEECCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE GIGIPGSLSPYTGVVKNANSTWLNGQPFDSDVSRRLKREVRLANDANCLAVSEAVDGAAA EECCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHCCHHH GAQTVFAVIIGTGCGAGVALNGRAHIGGNGTAGEWGHNPLPWMDDDELRYREEIPCYCGK HHHHEEHHEEECCCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC QGCIETFISGTGFATDYQRLSGKTLKGDEIIRLVDAQDAVAELAISRYELRLAKALSHVV HHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH NILDPDVIVLGGGMSNVERLYKTVPSLMKSFVFGGECETPVRKARHGDSSGVRGAAWLWP HHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCEECC LA CC >Mature Secondary Structure MRIGIDLGGTKTEVIALDDAGEQRFRHRLPTPREDYQQTIETIATLVDMAEQATGQTGSV CEEEEECCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE GIGIPGSLSPYTGVVKNANSTWLNGQPFDSDVSRRLKREVRLANDANCLAVSEAVDGAAA EECCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHCCHHH GAQTVFAVIIGTGCGAGVALNGRAHIGGNGTAGEWGHNPLPWMDDDELRYREEIPCYCGK HHHHEEHHEEECCCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC QGCIETFISGTGFATDYQRLSGKTLKGDEIIRLVDAQDAVAELAISRYELRLAKALSHVV HHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH NILDPDVIVLGGGMSNVERLYKTVPSLMKSFVFGGECETPVRKARHGDSSGVRGAAWLWP HHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCEECC LA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8807285; 9278503; 1744033 [H]