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The map label for this gene is 29142814

Identifier: 29142814

GI number: 29142814

Start: 2497966

End: 2498637

Strand: Reverse

Name: 29142814

Synonym: t2426

Alternate gene names: NA

Gene position: 2498637-2497966 (Counterclockwise)

Preceding gene: 161486792

Following gene: 29142813

Centisome position: 52.14

GC content: 42.26

Gene sequence:

>672_bases
GTGAAAATTAAATTCTTATCATTATGTATTTTAGCAGGTGTTTTATTTGCTAACCAGGTGAATGCATCAGAGAACAACAG
TAAAGATGATGTAAAATACGCTGCGCTTACCCAGAAGGATTTTGATGCTTTGCCTGTGGAAAAAAGAGCTTCGGTTCTGG
ATGAACTGGGGTTTATCCATGAATACGGCCTTAATGTACCGATGAATCGCGAACAGGCGTTGCAGTATTATAAGCAGGCC
TGTGAGCTTGGCGGTAACTACGGTTGCTATAATGTGAAGTATGCTTATCAGCATGGCGACGGAGTGGCGAAAGATAGCGC
TCAGGCCAATAAGTATGCTAAAAAAATGAATCTGGATAATTTATTGATTGAGCAAGAATATATTGACAAGTTTTCGCAAG
AAATTTACGTGGCGAAAGCATTGGCCGATATGGATAAATCGCAGCGGGCGGCATTTATTAGTATACTAATTCATGCTCTA
AATAATAGACCCGAGAGCGATGCGCTTTTTTTAGTCGTATCGGATTTAATCAGGAAAAAACGTTCCGCCTTGCTACGCTA
TGGGGGCAGGACGGCGATCCACAAATGGATTATCAACTGGGGTTACTCACCCTTAATGATTTCTCTGGCCATTATGTGGA
TGAGCCTTATAAAGCCAGGCCGGCCTCGTTGA

Upstream 100 bases:

>100_bases
CGAGACTGATAGCAAACTTTCTGCGTGATGGCGCGCGTTTATCAGGCAGAAGGTTAGTCATCAGTCTTATTTATTATATT
ATTCAAGGAGTGAATTAGTT

Downstream 100 bases:

>100_bases
AATGGTTTCGCGCCGCCGCGGAAAAAGGCGTCGTTGAGGCCCAATCTCTCTTGGGGGGTATTTATTCGGGGGGAGAGGGC
GATGAGTGGGGGATTAAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Sel1 Domain Protein Repeat-Containing Protein; Tetratricopeptide Repeat Protein

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKIKFLSLCILAGVLFANQVNASENNSKDDVKYAALTQKDFDALPVEKRASVLDELGFIHEYGLNVPMNREQALQYYKQA
CELGGNYGCYNVKYAYQHGDGVAKDSAQANKYAKKMNLDNLLIEQEYIDKFSQEIYVAKALADMDKSQRAAFISILIHAL
NNRPESDALFLVVSDLIRKKRSALLRYGGRTAIHKWIINWGYSPLMISLAIMWMSLIKPGRPR

Sequences:

>Translated_223_residues
MKIKFLSLCILAGVLFANQVNASENNSKDDVKYAALTQKDFDALPVEKRASVLDELGFIHEYGLNVPMNREQALQYYKQA
CELGGNYGCYNVKYAYQHGDGVAKDSAQANKYAKKMNLDNLLIEQEYIDKFSQEIYVAKALADMDKSQRAAFISILIHAL
NNRPESDALFLVVSDLIRKKRSALLRYGGRTAIHKWIINWGYSPLMISLAIMWMSLIKPGRPR
>Mature_223_residues
MKIKFLSLCILAGVLFANQVNASENNSKDDVKYAALTQKDFDALPVEKRASVLDELGFIHEYGLNVPMNREQALQYYKQA
CELGGNYGCYNVKYAYQHGDGVAKDSAQANKYAKKMNLDNLLIEQEYIDKFSQEIYVAKALADMDKSQRAAFISILIHAL
NNRPESDALFLVVSDLIRKKRSALLRYGGRTAIHKWIINWGYSPLMISLAIMWMSLIKPGRPR

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25293; Mature: 25293

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKFLSLCILAGVLFANQVNASENNSKDDVKYAALTQKDFDALPVEKRASVLDELGFIH
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
EYGLNVPMNREQALQYYKQACELGGNYGCYNVKYAYQHGDGVAKDSAQANKYAKKMNLDN
HHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCHHH
LLIEQEYIDKFSQEIYVAKALADMDKSQRAAFISILIHALNNRPESDALFLVVSDLIRKK
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
RSALLRYGGRTAIHKWIINWGYSPLMISLAIMWMSLIKPGRPR
HHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKIKFLSLCILAGVLFANQVNASENNSKDDVKYAALTQKDFDALPVEKRASVLDELGFIH
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
EYGLNVPMNREQALQYYKQACELGGNYGCYNVKYAYQHGDGVAKDSAQANKYAKKMNLDN
HHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCHHH
LLIEQEYIDKFSQEIYVAKALADMDKSQRAAFISILIHALNNRPESDALFLVVSDLIRKK
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
RSALLRYGGRTAIHKWIINWGYSPLMISLAIMWMSLIKPGRPR
HHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA