Click here to switch to the map view.

The map label for this gene is sfbA [H]

Identifier: 29142740

GI number: 29142740

Start: 2415935

End: 2416765

Strand: Reverse

Name: sfbA [H]

Synonym: t2350

Alternate gene names: 29142740

Gene position: 2416765-2415935 (Counterclockwise)

Preceding gene: 29142741

Following gene: 29142739

Centisome position: 50.43

GC content: 53.07

Gene sequence:

>831_bases
ATGGGATTGCGTCAGAGTTTACGCATTGCGGCCAGCACGCTATTACTGGCCTGCGGATTACAGTTTGCCCATGCCGATGG
TTCCCCGCAAACGATCGTATTTGGCGTCGCGCCAGGGCCGTATGGCGACATGGTGAAGCAGGCGATTGCGCCGACATTAA
AAGAAAAAGGGTATAAGGTCGTGGTGCGCGAGTTTAGCGACTATGTCCAGCCCAATATGGCGTTAGCTAACGGCAGCATC
GACGCCAACCTCTTTCAACATACCCTCTATTTTGACAAATTCACCGCTGACAAAGGGCTGAAGCTCAGCAAACTTATTGT
GGTACCGACCGCCGGGATGGGCTTCTATTCACGTAAAATCAACAGCCTGGATGCGCTTAAAAAAGGGGACATTATTACCC
TCTCCAACGATCCGACCAACCTGGCGCGCGGCCTTCGCTTCCTGCAATCGTTGGGGCTTATCACGATTAAGCACAATATC
GATCCGACCAAAGCCTCTGAACGAGATATCGCCAGCAATCCAAAAGGACTGGTTTTCAAACCGCTGGAAGCCGCACAGCT
ACCGCGCACGCTGGACGGCGTGACCGGCGCGCTGGTTAACGGGAACTTTGCGGTGGCGGCAGGACTCGATCTCTCCAGCG
CGATTAAGCAGGAACACCTGGATGAGAATCTGAAAAATATCATTGCGGTACGCAGTGAAGATGCCGATAAGCCGTTTGCC
AAAGATATTGTCGAGGCGGTGAAATCGCCGGCTTATCGCGCGGTCATCGACGATCCAAAGAATATTTATAGCGCCTTCCA
GAAACCGGAATGGATGACCGCGACACCCTGA

Upstream 100 bases:

>100_bases
CTGTGTCATGTTAAGAAATAGCCTTTCGTTTGGGCCAAAACAGACGATGCCGCATGAACGGCATCCGGCACAGCATCACA
CTATTTAAAATGGAGAAATT

Downstream 100 bases:

>100_bases
TCGCAGCGGTGGCCATCCCCAATTTCTGAGGTGAATATGATTGAAATAGAAAAAGTCTGCGTCGATTTTACCGCCGGTCG
CGGTACCCCCACGCGCGCGG

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MGLRQSLRIAASTLLLACGLQFAHADGSPQTIVFGVAPGPYGDMVKQAIAPTLKEKGYKVVVREFSDYVQPNMALANGSI
DANLFQHTLYFDKFTADKGLKLSKLIVVPTAGMGFYSRKINSLDALKKGDIITLSNDPTNLARGLRFLQSLGLITIKHNI
DPTKASERDIASNPKGLVFKPLEAAQLPRTLDGVTGALVNGNFAVAAGLDLSSAIKQEHLDENLKNIIAVRSEDADKPFA
KDIVEAVKSPAYRAVIDDPKNIYSAFQKPEWMTATP

Sequences:

>Translated_276_residues
MGLRQSLRIAASTLLLACGLQFAHADGSPQTIVFGVAPGPYGDMVKQAIAPTLKEKGYKVVVREFSDYVQPNMALANGSI
DANLFQHTLYFDKFTADKGLKLSKLIVVPTAGMGFYSRKINSLDALKKGDIITLSNDPTNLARGLRFLQSLGLITIKHNI
DPTKASERDIASNPKGLVFKPLEAAQLPRTLDGVTGALVNGNFAVAAGLDLSSAIKQEHLDENLKNIIAVRSEDADKPFA
KDIVEAVKSPAYRAVIDDPKNIYSAFQKPEWMTATP
>Mature_275_residues
GLRQSLRIAASTLLLACGLQFAHADGSPQTIVFGVAPGPYGDMVKQAIAPTLKEKGYKVVVREFSDYVQPNMALANGSID
ANLFQHTLYFDKFTADKGLKLSKLIVVPTAGMGFYSRKINSLDALKKGDIITLSNDPTNLARGLRFLQSLGLITIKHNID
PTKASERDIASNPKGLVFKPLEAAQLPRTLDGVTGALVNGNFAVAAGLDLSSAIKQEHLDENLKNIIAVRSEDADKPFAK
DIVEAVKSPAYRAVIDDPKNIYSAFQKPEWMTATP

Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=249, Percent_Identity=36.9477911646586, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1790093, Length=248, Percent_Identity=31.4516129032258, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 29841; Mature: 29709

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLRQSLRIAASTLLLACGLQFAHADGSPQTIVFGVAPGPYGDMVKQAIAPTLKEKGYKV
CCCHHHHHHHHHHHHHHHCCHHEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEE
VVREFSDYVQPNMALANGSIDANLFQHTLYFDKFTADKGLKLSKLIVVPTAGMGFYSRKI
EHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHH
NSLDALKKGDIITLSNDPTNLARGLRFLQSLGLITIKHNIDPTKASERDIASNPKGLVFK
HHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHCCCCCCCEEC
PLEAAQLPRTLDGVTGALVNGNFAVAAGLDLSSAIKQEHLDENLKNIIAVRSEDADKPFA
CCHHHHCCHHHHCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHH
KDIVEAVKSPAYRAVIDDPKNIYSAFQKPEWMTATP
HHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GLRQSLRIAASTLLLACGLQFAHADGSPQTIVFGVAPGPYGDMVKQAIAPTLKEKGYKV
CCHHHHHHHHHHHHHHHCCHHEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEE
VVREFSDYVQPNMALANGSIDANLFQHTLYFDKFTADKGLKLSKLIVVPTAGMGFYSRKI
EHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHH
NSLDALKKGDIITLSNDPTNLARGLRFLQSLGLITIKHNIDPTKASERDIASNPKGLVFK
HHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHCCCCCCCEEC
PLEAAQLPRTLDGVTGALVNGNFAVAAGLDLSSAIKQEHLDENLKNIIAVRSEDADKPFA
CCHHHHCCHHHHCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHH
KDIVEAVKSPAYRAVIDDPKNIYSAFQKPEWMTATP
HHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]