Click here to switch to the map view.

The map label for this gene is allC [H]

Identifier: 29142726

GI number: 29142726

Start: 2397921

End: 2399156

Strand: Direct

Name: allC [H]

Synonym: t2334

Alternate gene names: 29142726

Gene position: 2397921-2399156 (Clockwise)

Preceding gene: 29142725

Following gene: 29142727

Centisome position: 50.04

GC content: 53.24

Gene sequence:

>1236_bases
ATGATAAAGCATTTTCGCCACGCGATAGAAGAAACATTGCCCTGGCTCTCTTCCATTGGAGCCGATCCTACGGGTGGAAT
GACGCGTTTACTTTATTCGCCTGAGTGGCTGGAAACACAGCAGCAATTTAAAAAGCGAATGGCAGAAAGCGGTCTGGAAA
CACGCTTTGATGACGTCGGAAATTTATATGGCCGCCTTTGCGGCACACAATTTCCGGAGCAGGTGATTTTAAGCGGTTCG
CATATTGATACGGTCGTCAACGGCGGCAATCTGGACGGACAATTCGGCGCGCTTGCCGCCTGGCTGGCGCTCGACTGGCT
AAAAGCGACCTACGGCGCGCCGCTGCGCACCGTCGAAGTAGTGTCAATGGCAGAGGAAGAAGGCAGCCGTTTCCCTTACG
TTTTTTGGGGCAGCAAGAACATTTTTGGCCTAGCGAATCCTGAAGAGGTACGCTATATCCAGGACGCCAAAGGCACAGGC
GTTGTCGACGCTATGCAGGCGTGCGGATTTACCCTTCCCGCCGCGCCGCTCGCTGCGCGAACCGATATCCGCGCCTTTGT
TGAATTGCATATTGAGCAAGGCTGCGTTCTGGAGAGCAACGGACAGTCGATTGGCGTCGTCAACGCCATCGTCGGGCAAC
GTCGCTACACGGTGACGCTCAACGGCGAGTCCAACCATGCAGGCACAACGCCAATGGGCTATCGTCGCGATACGGTGCAT
GCCTTCAGTCGTATTTGCAGTCAGTCCATTGAAAAAGCCAAACAGCATGGCGATCCCCTGGTATTAACGTTCGGCAAAGT
TGAGCCGCAGCCGAATACGGTCAATGTTGTCCCTGGAAAAACCACATTTACAATCGATTGCCGGCATACGGACGCCGCGG
TACTTCGCGAATTTACCGAACAGTTGGAAAACAATATGCGCGCCATCTGCGATGAAATGGATATCAGCATCGATATCGAT
TTGTGGATGGACGAAGCGCCGGTGCCGATGAACGCCGAACTGGTCGCGGCCCTCACCAGGCTGTGTGAAACCGAACAACT
GAACTATCGCATAATGCATAGCGGCGCAGGTCATGACGCGCAAATTTTCGCGCCGCGCGTCCCTACCTGTATGATTTTCG
TCCCCAGCATTAATGGTATCAGCCATAACCCGGCGGAACGTACCAACATTAATGACCTTGCTGAAGGGGTCAAAACTCTG
GCATTAATGCTTCATCAACTTGCCTGGCAAAAATAA

Upstream 100 bases:

>100_bases
TGATGATATTTATCAATATCTGATTTCCGATGCCCTCTATCTCAAGTCATACGAAACAAAAAATCCCTTTGCCCAATAAT
TATTGAAACAGGAATTTTCT

Downstream 100 bases:

>100_bases
GGAGCCATCAATGGGATATCTGAATAACGTCACGGGTTACCGCGATGATTTACTGGCGAACCGCGCCATTGTGAAACACG
GTAACTATGCGCTCTTAACG

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: Allantoate deiminase [H]

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MIKHFRHAIEETLPWLSSIGADPTGGMTRLLYSPEWLETQQQFKKRMAESGLETRFDDVGNLYGRLCGTQFPEQVILSGS
HIDTVVNGGNLDGQFGALAAWLALDWLKATYGAPLRTVEVVSMAEEEGSRFPYVFWGSKNIFGLANPEEVRYIQDAKGTG
VVDAMQACGFTLPAAPLAARTDIRAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVH
AFSRICSQSIEKAKQHGDPLVLTFGKVEPQPNTVNVVPGKTTFTIDCRHTDAAVLREFTEQLENNMRAICDEMDISIDID
LWMDEAPVPMNAELVAALTRLCETEQLNYRIMHSGAGHDAQIFAPRVPTCMIFVPSINGISHNPAERTNINDLAEGVKTL
ALMLHQLAWQK

Sequences:

>Translated_411_residues
MIKHFRHAIEETLPWLSSIGADPTGGMTRLLYSPEWLETQQQFKKRMAESGLETRFDDVGNLYGRLCGTQFPEQVILSGS
HIDTVVNGGNLDGQFGALAAWLALDWLKATYGAPLRTVEVVSMAEEEGSRFPYVFWGSKNIFGLANPEEVRYIQDAKGTG
VVDAMQACGFTLPAAPLAARTDIRAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVH
AFSRICSQSIEKAKQHGDPLVLTFGKVEPQPNTVNVVPGKTTFTIDCRHTDAAVLREFTEQLENNMRAICDEMDISIDID
LWMDEAPVPMNAELVAALTRLCETEQLNYRIMHSGAGHDAQIFAPRVPTCMIFVPSINGISHNPAERTNINDLAEGVKTL
ALMLHQLAWQK
>Mature_411_residues
MIKHFRHAIEETLPWLSSIGADPTGGMTRLLYSPEWLETQQQFKKRMAESGLETRFDDVGNLYGRLCGTQFPEQVILSGS
HIDTVVNGGNLDGQFGALAAWLALDWLKATYGAPLRTVEVVSMAEEEGSRFPYVFWGSKNIFGLANPEEVRYIQDAKGTG
VVDAMQACGFTLPAAPLAARTDIRAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVH
AFSRICSQSIEKAKQHGDPLVLTFGKVEPQPNTVNVVPGKTTFTIDCRHTDAAVLREFTEQLENNMRAICDEMDISIDID
LWMDEAPVPMNAELVAALTRLCETEQLNYRIMHSGAGHDAQIFAPRVPTCMIFVPSINGISHNPAERTNINDLAEGVKTL
ALMLHQLAWQK

Specific function: Involved in the anaerobic utilization of allantoin. Converts allantoate to (S)-ureidoglycolate and ammonia [H]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=411, Percent_Identity=88.0778588807786, Blast_Score=770, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017591
- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: 3.5.3.-

Molecular weight: Translated: 45374; Mature: 45374

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKHFRHAIEETLPWLSSIGADPTGGMTRLLYSPEWLETQQQFKKRMAESGLETRFDDVG
CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHH
NLYGRLCGTQFPEQVILSGSHIDTVVNGGNLDGQFGALAAWLALDWLKATYGAPLRTVEV
HHHHHHHCCCCCHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
VSMAEEEGSRFPYVFWGSKNIFGLANPEEVRYIQDAKGTGVVDAMQACGFTLPAAPLAAR
HHHHHHCCCCCCEEEECCCCEEECCCHHHHHEECCCCCCCHHHHHHHCCCCCCCCCHHHH
TDIRAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVH
HHHHHHHHHHHCCCEEEECCCCEEEHHHHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHH
AFSRICSQSIEKAKQHGDPLVLTFGKVEPQPNTVNVVPGKTTFTIDCRHTDAAVLREFTE
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCEEEEEEECCCCHHHHHHHHH
QLENNMRAICDEMDISIDIDLWMDEAPVPMNAELVAALTRLCETEQLNYRIMHSGAGHDA
HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCC
QIFAPRVPTCMIFVPSINGISHNPAERTNINDLAEGVKTLALMLHQLAWQK
EEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKHFRHAIEETLPWLSSIGADPTGGMTRLLYSPEWLETQQQFKKRMAESGLETRFDDVG
CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHH
NLYGRLCGTQFPEQVILSGSHIDTVVNGGNLDGQFGALAAWLALDWLKATYGAPLRTVEV
HHHHHHHCCCCCHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
VSMAEEEGSRFPYVFWGSKNIFGLANPEEVRYIQDAKGTGVVDAMQACGFTLPAAPLAAR
HHHHHHCCCCCCEEEECCCCEEECCCHHHHHEECCCCCCCHHHHHHHCCCCCCCCCHHHH
TDIRAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVH
HHHHHHHHHHHCCCEEEECCCCEEEHHHHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHH
AFSRICSQSIEKAKQHGDPLVLTFGKVEPQPNTVNVVPGKTTFTIDCRHTDAAVLREFTE
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCEEEEEEECCCCHHHHHHHHH
QLENNMRAICDEMDISIDIDLWMDEAPVPMNAELVAALTRLCETEQLNYRIMHSGAGHDA
HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCC
QIFAPRVPTCMIFVPSINGISHNPAERTNINDLAEGVKTLALMLHQLAWQK
EEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10601204; 9278503 [H]