Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is ybeZ [H]
Identifier: 29142606
GI number: 29142606
Start: 2270006
End: 2271091
Strand: Direct
Name: ybeZ [H]
Synonym: t2204
Alternate gene names: 29142606
Gene position: 2270006-2271091 (Clockwise)
Preceding gene: 29142605
Following gene: 29142607
Centisome position: 47.37
GC content: 53.87
Gene sequence:
>1086_bases ATGTTCAGCGTCCGGCGATACAGACACAAGAGGAACAGTTTGAATATAGACACTCGCGAAATTACCCTTGAGCCCGCAGA CAACGCCCGTCTGTTGAGCCTTTGCGGGCCGTTTGATGACAATATTAAACAGCTCGAACGTCGTCTCGGTATTGAAATCA ACCGCCGTGACAATCACTTTAAACTGACCGGTCGTCCGATTTGCGTGACCGCGGCGACAGATATTTTGCGAAGTCTGTAT GTCGATACCGCACCGATGCGCGGCCAGACTCAGGATATCGAACCGGAACAAATTCATCTGGCGATCAAAGAAGCGCGGGT GCTGGAACAGAGCGCGGAAAGCGTGCCTGACTATGGCAAAGCTATTAATATCAAAACCAAGCGCGGCGTGATTAAACCGC GTACCCCGAACCAGGCGCAGTACATCGCCAATATTCTCGATCATGATATTACCTTTGGCGTCGGCCCGGCGGGTACCGGT AAAACTTATCTTGCGGTCGCCGCTGCGGTAGACGCCCTGGAGCGCCAGGAGATTCGCCGTATTCTACTGACCCGTCCGGC GGTGGAAGCGGGCGAAAAACTCGGCTTTCTGCCAGGCGATTTAAGTCAGAAGGTGGACCCGTACCTGCGTCCGCTGTATG ACGCGCTGTTCGAAATGCTCGGCTTTGAAAAAGTCGAGAAGCTGATTGAGCGCAATGTGATTGAAGTCGCGCCGCTGGCC TATATGCGCGGACGCACATTAAACGACGCCTTTATCATTCTGGATGAAAGCCAGAACACCACTATCGAACAGATGAAGAT GTTCCTGACGCGTATCGGCTTTAACTCGAAAGCGGTGATCACCGGCGACGTGACGCAGATTGACCTGCCACGCAACACCA AATCCGGCTTGCGTCATGCCATTGAAGTGCTGGCGGAAGTCGATGAAATCAGCTTTAACTTCTTCCACAGCGAAGACGTG GTGCGCCATCCGGTCGTTGCCCGCATTGTGAACGCCTATGAAGCCTGGGAAGAGGCCGAACAAAAACGCAAAGCGGCGTT GGCGGCGGAGCGTAAGCGTGAAGCCCAGGAGCAGGAACAGAAATGA
Upstream 100 bases:
>100_bases CGCCCGACGGGCCTTGCAATTTTCTCTCTTCATCCCCATCTTCATTGCAATGCTTGCGCCTTTTCCCTATGGCGTGAATA ATTTCCTTAGATGCCGGTAA
Downstream 100 bases:
>100_bases GCCAGGTGATCCTCGATTTACAGTTGGCCTGTGAAAACCACGCGGGCCTGCCGGATGAAGCTCAGTTTCAACGCTGGCTG GACGGCGTTATTCCGCAGTT
Product: PhoH-like ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MFSVRRYRHKRNSLNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHFKLTGRPICVTAATDILRSLY VDTAPMRGQTQDIEPEQIHLAIKEARVLEQSAESVPDYGKAINIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTG KTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLA YMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHAIEVLAEVDEISFNFFHSEDV VRHPVVARIVNAYEAWEEAEQKRKAALAAERKREAQEQEQK
Sequences:
>Translated_361_residues MFSVRRYRHKRNSLNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHFKLTGRPICVTAATDILRSLY VDTAPMRGQTQDIEPEQIHLAIKEARVLEQSAESVPDYGKAINIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTG KTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLA YMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHAIEVLAEVDEISFNFFHSEDV VRHPVVARIVNAYEAWEEAEQKRKAALAAERKREAQEQEQK >Mature_361_residues MFSVRRYRHKRNSLNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHFKLTGRPICVTAATDILRSLY VDTAPMRGQTQDIEPEQIHLAIKEARVLEQSAESVPDYGKAINIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTG KTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLA YMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHAIEVLAEVDEISFNFFHSEDV VRHPVVARIVNAYEAWEEAEQKRKAALAAERKREAQEQEQK
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=346, Percent_Identity=97.3988439306358, Blast_Score=672, Evalue=0.0, Organism=Escherichia coli, GI1787257, Length=206, Percent_Identity=44.1747572815534, Blast_Score=186, Evalue=2e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 40957; Mature: 40957
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSVRRYRHKRNSLNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHF CCCHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCEEECCCCEE KLTGRPICVTAATDILRSLYVDTAPMRGQTQDIEPEQIHLAIKEARVLEQSAESVPDYGK EECCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC AINIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRR EEEEECCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHH ILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLA HHHCCCCHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHH YMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHA HHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHH IEVLAEVDEISFNFFHSEDVVRHPVVARIVNAYEAWEEAEQKRKAALAAERKREAQEQEQ HHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC K C >Mature Secondary Structure MFSVRRYRHKRNSLNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHF CCCHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCEEECCCCEE KLTGRPICVTAATDILRSLYVDTAPMRGQTQDIEPEQIHLAIKEARVLEQSAESVPDYGK EECCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC AINIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRR EEEEECCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHH ILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLA HHHCCCCHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHH YMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHA HHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHH IEVLAEVDEISFNFFHSEDVVRHPVVARIVNAYEAWEEAEQKRKAALAAERKREAQEQEQ HHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]