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The map label for this gene is ybhR [H]

Identifier: 29142491

GI number: 29142491

Start: 2136559

End: 2137665

Strand: Direct

Name: ybhR [H]

Synonym: t2073

Alternate gene names: 29142491

Gene position: 2136559-2137665 (Clockwise)

Preceding gene: 29142490

Following gene: 29142493

Centisome position: 44.59

GC content: 52.94

Gene sequence:

>1107_bases
ATGTTTCATCGTTTATGGACGTTAATTCGCAAAGAACTGCAATCGCTTTTACGCGAACCGCAAACGCGCGCGATCCTGAT
TCTGCCGGTGCTGATTCAGGTCATCCTGTTTCCGTTCGCCGCGACGCTTGAAGTCACTAACGCGACTATCGCCATCTATA
ACGAAGATAACGGCAAACATTCGGTAGAACTTACCCAGCGTTTTGCCCGCGCGAAAGCGTTTACCCATGTGCTATTGCTG
AACAGTCCGCAGGAGATCCAGCCGACTATCGATACGCAAAAAGCGCTGCTGCTGGTGCGCTTCCCGGCGGATTTCTCGCG
GAATCTGGATACCTTCCAGCCTGCGCCGATGCAACTCATTCTTGATGGACGTAACTCCAACAGCGCGCAAATTGCCGCCA
ATTATCTGCAACAGATCGTCAAGGAGTATCAGCAGACATTGATGGACGGCAAGCCAAAGCCCAACAATAGCGAACTGGTG
GTACGCAACTGGTATAACCCGAATCTGGACTACAAGTGGTTTGTGGTGCCCTCGCTGATCGCCATGATCACCACTATCGG
CGTGATGATCGTCACTTCGCTGTCCGTCGCCCGCGAGCGTGAACAAGGCACTCTGGATCAGCTGCTGGTCTCTCCGCTCA
CCACCTGGCAGATTTTCGTCGGCAAAGCGGTGCCGGCGCTGATTGTCGCGACCTTCCAGGCCACGATCGTGCTGGCTATC
GGCATTTGGGCATACCAAATTCCCTTCGCCGGTTCGTTAGCGCTGTTTTATTTCACGATGGTGATTTACGGGCTGTCGCT
GGTAGGCTTTGGCTTGCTGATATCAGCACTTTGCGCCACGCAACAGCAGGCGTTTATCGGCGTCTTTGTCTTTATGATGC
CGGCGATTTTGCTCTCGGGTTATGTCTCGCCGGTGGAAAATATGCCGGTCTGGCTGCAAAACCTGACGTGGATAAATCCT
ATCCGCCACTTTACTGATATTACTAAGCAAATTTATCTTAAGGACGCGAGTCTGGGGATTGTCTGGGGAAGTTTGTGGCC
GCTACTGGTGATAGCGGCCACCACGGGTTCAGCGGCGTATGCGATGTTTAGACGCAAAGTGATGTAG

Upstream 100 bases:

>100_bases
ATTGTCGTCGTAGGCCGGATAAGGCGCTCACGCCGCCATCCGGCATTATGCCTGATGCGCTTTGCTTATCAGGCCTACAA
ACTGGACTGAGAGGACGGGC

Downstream 100 bases:

>100_bases
CTTTTTATCTTTCGCCAGTAGCGAGACCACGGCGGGCCCGGCCAGGATAGCCAGCCCCGCCAGCGCCAGTAAAACATTGT
TTTGCAATACGCGGGATAGC

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYNEDNGKHSVELTQRFARAKAFTHVLLL
NSPQEIQPTIDTQKALLLVRFPADFSRNLDTFQPAPMQLILDGRNSNSAQIAANYLQQIVKEYQQTLMDGKPKPNNSELV
VRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFVGKAVPALIVATFQATIVLAI
GIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISALCATQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINP
IRHFTDITKQIYLKDASLGIVWGSLWPLLVIAATTGSAAYAMFRRKVM

Sequences:

>Translated_368_residues
MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYNEDNGKHSVELTQRFARAKAFTHVLLL
NSPQEIQPTIDTQKALLLVRFPADFSRNLDTFQPAPMQLILDGRNSNSAQIAANYLQQIVKEYQQTLMDGKPKPNNSELV
VRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFVGKAVPALIVATFQATIVLAI
GIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISALCATQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINP
IRHFTDITKQIYLKDASLGIVWGSLWPLLVIAATTGSAAYAMFRRKVM
>Mature_368_residues
MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYNEDNGKHSVELTQRFARAKAFTHVLLL
NSPQEIQPTIDTQKALLLVRFPADFSRNLDTFQPAPMQLILDGRNSNSAQIAANYLQQIVKEYQQTLMDGKPKPNNSELV
VRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFVGKAVPALIVATFQATIVLAI
GIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISALCATQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINP
IRHFTDITKQIYLKDASLGIVWGSLWPLLVIAATTGSAAYAMFRRKVM

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=368, Percent_Identity=95.1086956521739, Blast_Score=714, Evalue=0.0,
Organism=Escherichia coli, GI1787011, Length=335, Percent_Identity=25.3731343283582, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI48994943, Length=354, Percent_Identity=22.316384180791, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI226510979, Length=374, Percent_Identity=23.7967914438503, Blast_Score=104, Evalue=1e-23,
Organism=Drosophila melanogaster, GI85725260, Length=367, Percent_Identity=23.1607629427793, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI85725262, Length=367, Percent_Identity=23.1607629427793, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24650855, Length=226, Percent_Identity=23.8938053097345, Blast_Score=65, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24650853, Length=226, Percent_Identity=23.8938053097345, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41363; Mature: 41363

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYNEDNGKH
CHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHEEEECEEEEEEECCCCCC
SVELTQRFARAKAFTHVLLLNSPQEIQPTIDTQKALLLVRFPADFSRNLDTFQPAPMQLI
HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEEEEECCCCHHCCCCCCCCCCEEEE
LDGRNSNSAQIAANYLQQIVKEYQQTLMDGKPKPNNSELVVRNWYNPNLDYKWFVVPSLI
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEHHHHHH
AMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFVGKAVPALIVATFQATIVLAI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISALCATQQQAFIGVFVFMMPAILLSG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVSPVENMPVWLQNLTWINPIRHFTDITKQIYLKDASLGIVWGSLWPLLVIAATTGSAAY
CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHCCCCHHHH
AMFRRKVM
HHHHHHCC
>Mature Secondary Structure
MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYNEDNGKH
CHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHEEEECEEEEEEECCCCCC
SVELTQRFARAKAFTHVLLLNSPQEIQPTIDTQKALLLVRFPADFSRNLDTFQPAPMQLI
HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEEEEECCCCHHCCCCCCCCCCEEEE
LDGRNSNSAQIAANYLQQIVKEYQQTLMDGKPKPNNSELVVRNWYNPNLDYKWFVVPSLI
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEHHHHHH
AMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFVGKAVPALIVATFQATIVLAI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISALCATQQQAFIGVFVFMMPAILLSG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVSPVENMPVWLQNLTWINPIRHFTDITKQIYLKDASLGIVWGSLWPLLVIAATTGSAAY
CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHCCCCHHHH
AMFRRKVM
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]