Click here to switch to the map view.

The map label for this gene is ybjP [H]

Identifier: 29142425

GI number: 29142425

Start: 2064138

End: 2064653

Strand: Direct

Name: ybjP [H]

Synonym: t2004

Alternate gene names: 29142425

Gene position: 2064138-2064653 (Clockwise)

Preceding gene: 29142422

Following gene: 29142426

Centisome position: 43.08

GC content: 56.59

Gene sequence:

>516_bases
ATGCGCTATTCTAAACTCTCTTTGCTCATCCCGTGCGCGCTTCTGCTTAGCGCCTGTACGACCGTCACTCCCGCCTACAA
AGATAATGGCCCGCGTATCGGCGCGTGTGTGGAAGGCGGCCCGGACAGCGTGGCTCAACAATTTTACGACTACCGTATTC
AACACCACAGCAATGATATCGCCGCGCTTCGCCCCTACTTGAGTGATAACCTGGCGAAATTGTTGACCGACGCCAGCCGC
GATACGGAACACCGCCAGTTGATGAGCGGCGATATGTTCTCCAGCCGCGCTACGCTGCCGGATAGCGCCAACGTCGCCAG
CGCATCAACCATTCCGAACCGAGATGCGCGCAATATTCCTCTGCGGGTGGCGTTAAAACAGGGCGATCAAAGCTGGCAGG
ATGAAGTGCTTATGATTCACGAAGGCTCATGCTGGGTGATTGACGACGTTCGCTATCTGGGCGGAGATGTCCATGCCCCT
GCCGGTACGCTGCGCCAGTCGATAGAAAACCGTTAA

Upstream 100 bases:

>100_bases
ACGATCTCAAACGCATTATCAAGCTGATACGCTATCATTGAAAGGATATAATTGATTATCGTAGATCGGTTTTTGCTCGA
TCGCCTATAAGGAAATCATC

Downstream 100 bases:

>100_bases
CAGTCAGTATTCCCCGCTTTTGCACCCATAACCCCGTAAATTGTCTGGCATTCTGCACGGGATGCCGACAATTCTTCTTA
CCTACTATTCCTCCTGCTAT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MRYSKLSLLIPCALLLSACTTVTPAYKDNGPRIGACVEGGPDSVAQQFYDYRIQHHSNDIAALRPYLSDNLAKLLTDASR
DTEHRQLMSGDMFSSRATLPDSANVASASTIPNRDARNIPLRVALKQGDQSWQDEVLMIHEGSCWVIDDVRYLGGDVHAP
AGTLRQSIENR

Sequences:

>Translated_171_residues
MRYSKLSLLIPCALLLSACTTVTPAYKDNGPRIGACVEGGPDSVAQQFYDYRIQHHSNDIAALRPYLSDNLAKLLTDASR
DTEHRQLMSGDMFSSRATLPDSANVASASTIPNRDARNIPLRVALKQGDQSWQDEVLMIHEGSCWVIDDVRYLGGDVHAP
AGTLRQSIENR
>Mature_171_residues
MRYSKLSLLIPCALLLSACTTVTPAYKDNGPRIGACVEGGPDSVAQQFYDYRIQHHSNDIAALRPYLSDNLAKLLTDASR
DTEHRQLMSGDMFSSRATLPDSANVASASTIPNRDARNIPLRVALKQGDQSWQDEVLMIHEGSCWVIDDVRYLGGDVHAP
AGTLRQSIENR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787090, Length=171, Percent_Identity=84.2105263157895, Blast_Score=300, Evalue=3e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18828; Mature: 18828

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYSKLSLLIPCALLLSACTTVTPAYKDNGPRIGACVEGGPDSVAQQFYDYRIQHHSNDI
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCH
AALRPYLSDNLAKLLTDASRDTEHRQLMSGDMFSSRATLPDSANVASASTIPNRDARNIP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LRVALKQGDQSWQDEVLMIHEGSCWVIDDVRYLGGDVHAPAGTLRQSIENR
EEEEEECCCCCCCCCEEEEECCCEEEEECHHHHCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MRYSKLSLLIPCALLLSACTTVTPAYKDNGPRIGACVEGGPDSVAQQFYDYRIQHHSNDI
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCH
AALRPYLSDNLAKLLTDASRDTEHRQLMSGDMFSSRATLPDSANVASASTIPNRDARNIP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LRVALKQGDQSWQDEVLMIHEGSCWVIDDVRYLGGDVHAPAGTLRQSIENR
EEEEEECCCCCCCCCEEEEECCCEEEEECHHHHCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 10806384 [H]