| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is ycaI [H]
Identifier: 29142374
GI number: 29142374
Start: 2000168
End: 2002432
Strand: Reverse
Name: ycaI [H]
Synonym: t1951
Alternate gene names: 29142374
Gene position: 2002432-2000168 (Counterclockwise)
Preceding gene: 29142375
Following gene: 29142373
Centisome position: 41.79
GC content: 55.19
Gene sequence:
>2265_bases ATGAAGATAACGACGGTCAGCGTATGCGTAGTATGCGGCATACTTCCGCTCATGATATTGCCAGTATTACCTGATACGTG GATTCTCGCGGTGCTGTTTTGTCTGGCATGTTTGCTTTGCCTCATACCCCATCACTATGCGCGCTACGCGGCATTAACCT TGCTCTTTTTCATGTGGGGGATTTTTGCCGCCAGGCAGGCCATCTGGGTGGGAAACGTCCTGCCCGCCGCGACGCAGGAG GCGACAGTCGTCATTACTGCCACCGATCATATGACCACTCATTATGGGCGAATTACCCATTTGCATGGAAAGCCACTCTT TCCTGCTGTAGGGATTGTCCTGCATGGCCAGTACTTACCCACGGAAGTGTGTGCCGGACAGCAGTGGGCGATGACGCTGA AGGTCAGAGCGGTACACGGACAGCTTAACGAAGGCGGTTTTGATAGCCAGCGTTACGCGCTGGCGCAGCACCAACCGTTG ACCGGGCGTTTTCTACAGGCTAAAGCGATTAACCCTGAGTGTAGCTTGCGTGGGCGCTATCTTGCTTCGCTTCGCGCTAC GCTTGCGCCTTATCCGTGGCAGCAGGTTATTCTGGCGTTGGGAATGGGGGAGCGGGGAGCGGTGTCGCAGGAGGTGAAGG CCGTTATGCGCGATACGGGGACTGCCCATTTGATGGCGATTTCCGGCCTGCATATCGCTTTTGCTGCGTTATTGGCTGCC GGATTAATCCGTGGCGGACAATTCTTTTTGCCGGTCAGATGGATTCGTTGGCAGACGCCATTGCTGGGCGGCATTCTTTG CGCGATATGTTATGCCTGGCTTACCGGCTTACAACCGCCTGCGCTGCGCACGGTGGCGGCACTGAGCGTCTGGGGAGGAT TGAAATTAAGCGGACGACAGTGGAGCGGCTGGCAAGTCTGGTGCTGCTGTCTGGCCGCGATTATTTTCGCCGATCCTGTG GCGGTTATATCACAAAGTCTTTGGCTGTCAGCATTTGCGGTTGCCGGCCTGTTATTCTGGTATCAGTGGTTTCCTGCGCC AAACGGAAATTTTCCACGAGGCTTACGCTGGTTGCTTAACCTGCTTCACCTACAGGCAGGCATTACACTTCTGCTTTTGC CTCTCCAGGTGGCGCTTTTTCATGGCATAAGCGTTACCGCAATGCTGGCGAATCTTTTTGCCGTACCTTGGGTCACATTT GTGACGGTTCCACTCATCCTGGCGGGAATGATTCTGCATTTAACCGGGCCGTTTTTTCTTGAAGAGTGGGTATGGTACCT GACCGATCGCGCGTTAGCCGCGCTATTTTACCTGTTGAATGCTTTACCGCAGGGCTGGGTGAATATTGATAACCGTTGGC AGTGGCTGACGCTTTTACCCTGGCTAACGCTTATCGCGTGGCGATTAAACGTCTGGCGTACCTGGCCGGCGGTCTGTTTA TGCGGGTTATTGTTGATGAGCTGGCCACTCTGGCGGCCGATAAACGCCAGCGGATGGCAGGTGCATATGCTGGATGTCGG TCAGGGGCTGGCGATAGCGATCGTCAGGGGCGATAAAGTAATACTCTACGATACCGGTCGGGCATGGCCGGAGGGCGACA GCGGGCAACAGGTTATTATTCCCTGGTTGCGCTGGCATAATCTGACGCCGGAGGGCGTTATTTTGAGTCATGAGCATCTG GATCATCGGGGCGGGCTGCGTTCGCTACAGCAGGTCTGGCCGTCAATGTGGATTCGCAGCCCGTTAGGCTGGCAGGGACA TTTGCCCTGTTTTCGCGGCGAGCAGTGGCAATGGCAGGGGCTAACGTTTCAGGCGCACTGGCCGTTACGCGAAAGTGCCG ATCGAGGAAATAACCGTTCTTGTGTGGTCAAAGTGGATGACGGTGTACATAGCATCCTGCTCACGGGCGATATCGAAGCG GGCGCTGAACAAAAAATGCTAAGTCGTTACTGGCGACATCTTGCGGCGACGTTTATCCAGGTGCCGCATCATGGTAGTAA TACGTCGTCGTCGTTACCATTTATTCAGCGCGTACATGGTGAAGCGGCGCTGGCGTCCGCATCGCGCTATAACGCATGGC GGCTGCCGTCCCGCAAGGTAAAACAGCGCTACCGACAGCAGGCGTATCAGTGGTTTGATACACCCCACCAGGGGCAAATT TCGCTGCTGTTTTCTCCGCAGGGCTGGCGCATACAAGGCTTACGGGATCAAATTTTACCTCGCTGGTATCATCAGTGGTT TGGCGTGTCCGAGGATAACGGGTAG
Upstream 100 bases:
>100_bases TTATCAGGTAAAAAACCTGGAATCCGCGCCGTATAGCACAAAATCCCCTCCAGACAATGGCGTCCTGAACCTGCACACTT TCCCGCACAGGGAGGTGTCT
Downstream 100 bases:
>100_bases AATATGCGGCTATTTCAACAAATGCTGGTTTTTTGAATGCATAACGATAAAGATCTCTCTACGTGGCAGACCTTCCGCCG ACTGTGGCCAACCATAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 754; Mature: 754
Protein sequence:
>754_residues MKITTVSVCVVCGILPLMILPVLPDTWILAVLFCLACLLCLIPHHYARYAALTLLFFMWGIFAARQAIWVGNVLPAATQE ATVVITATDHMTTHYGRITHLHGKPLFPAVGIVLHGQYLPTEVCAGQQWAMTLKVRAVHGQLNEGGFDSQRYALAQHQPL TGRFLQAKAINPECSLRGRYLASLRATLAPYPWQQVILALGMGERGAVSQEVKAVMRDTGTAHLMAISGLHIAFAALLAA GLIRGGQFFLPVRWIRWQTPLLGGILCAICYAWLTGLQPPALRTVAALSVWGGLKLSGRQWSGWQVWCCCLAAIIFADPV AVISQSLWLSAFAVAGLLFWYQWFPAPNGNFPRGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTF VTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLLNALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTWPAVCL CGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLTPEGVILSHEHL DHRGGLRSLQQVWPSMWIRSPLGWQGHLPCFRGEQWQWQGLTFQAHWPLRESADRGNNRSCVVKVDDGVHSILLTGDIEA GAEQKMLSRYWRHLAATFIQVPHHGSNTSSSLPFIQRVHGEAALASASRYNAWRLPSRKVKQRYRQQAYQWFDTPHQGQI SLLFSPQGWRIQGLRDQILPRWYHQWFGVSEDNG
Sequences:
>Translated_754_residues MKITTVSVCVVCGILPLMILPVLPDTWILAVLFCLACLLCLIPHHYARYAALTLLFFMWGIFAARQAIWVGNVLPAATQE ATVVITATDHMTTHYGRITHLHGKPLFPAVGIVLHGQYLPTEVCAGQQWAMTLKVRAVHGQLNEGGFDSQRYALAQHQPL TGRFLQAKAINPECSLRGRYLASLRATLAPYPWQQVILALGMGERGAVSQEVKAVMRDTGTAHLMAISGLHIAFAALLAA GLIRGGQFFLPVRWIRWQTPLLGGILCAICYAWLTGLQPPALRTVAALSVWGGLKLSGRQWSGWQVWCCCLAAIIFADPV AVISQSLWLSAFAVAGLLFWYQWFPAPNGNFPRGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTF VTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLLNALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTWPAVCL CGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLTPEGVILSHEHL DHRGGLRSLQQVWPSMWIRSPLGWQGHLPCFRGEQWQWQGLTFQAHWPLRESADRGNNRSCVVKVDDGVHSILLTGDIEA GAEQKMLSRYWRHLAATFIQVPHHGSNTSSSLPFIQRVHGEAALASASRYNAWRLPSRKVKQRYRQQAYQWFDTPHQGQI SLLFSPQGWRIQGLRDQILPRWYHQWFGVSEDNG >Mature_754_residues MKITTVSVCVVCGILPLMILPVLPDTWILAVLFCLACLLCLIPHHYARYAALTLLFFMWGIFAARQAIWVGNVLPAATQE ATVVITATDHMTTHYGRITHLHGKPLFPAVGIVLHGQYLPTEVCAGQQWAMTLKVRAVHGQLNEGGFDSQRYALAQHQPL TGRFLQAKAINPECSLRGRYLASLRATLAPYPWQQVILALGMGERGAVSQEVKAVMRDTGTAHLMAISGLHIAFAALLAA GLIRGGQFFLPVRWIRWQTPLLGGILCAICYAWLTGLQPPALRTVAALSVWGGLKLSGRQWSGWQVWCCCLAAIIFADPV AVISQSLWLSAFAVAGLLFWYQWFPAPNGNFPRGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTF VTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLLNALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTWPAVCL CGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLTPEGVILSHEHL DHRGGLRSLQQVWPSMWIRSPLGWQGHLPCFRGEQWQWQGLTFQAHWPLRESADRGNNRSCVVKVDDGVHSILLTGDIEA GAEQKMLSRYWRHLAATFIQVPHHGSNTSSSLPFIQRVHGEAALASASRYNAWRLPSRKVKQRYRQQAYQWFDTPHQGQI SLLFSPQGWRIQGLRDQILPRWYHQWFGVSEDNG
Specific function: Unknown
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis ComEC, N.gonorrhoeae ComA, and H.influenzae Rec2 [H]
Homologues:
Organism=Escherichia coli, GI87081801, Length=754, Percent_Identity=69.893899204244, Blast_Score=1074, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR004477 - InterPro: IPR004797 [H]
Pfam domain/function: PF03772 Competence; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 84921; Mature: 84921
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITTVSVCVVCGILPLMILPVLPDTWILAVLFCLACLLCLIPHHYARYAALTLLFFMWG CCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH IFAARQAIWVGNVLPAATQEATVVITATDHMTTHYGRITHLHGKPLFPAVGIVLHGQYLP HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHCCCEEEECCCCCCHHHHHEEECCCCC TEVCAGQQWAMTLKVRAVHGQLNEGGFDSQRYALAQHQPLTGRFLQAKAINPECSLRGRY HHHHCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCHHH LASLRATLAPYPWQQVILALGMGERGAVSQEVKAVMRDTGTAHLMAISGLHIAFAALLAA HHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH GLIRGGQFFLPVRWIRWQTPLLGGILCAICYAWLTGLQPPALRTVAALSVWGGLKLSGRQ HHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEECCCC WSGWQVWCCCLAAIIFADPVAVISQSLWLSAFAVAGLLFWYQWFPAPNGNFPRGLRWLLN CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFL HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH EEWVWYLTDRALAALFYLLNALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTWPAVCL HHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH CGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVII HHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCEEEEEECCCCCCCCCCCCEEEE PWLRWHNLTPEGVILSHEHLDHRGGLRSLQQVWPSMWIRSPLGWQGHLPCFRGEQWQWQG EHHHHCCCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC LTFQAHWPLRESADRGNNRSCVVKVDDGVHSILLTGDIEAGAEQKMLSRYWRHLAATFIQ EEEEECCCCHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC VPHHGSNTSSSLPFIQRVHGEAALASASRYNAWRLPSRKVKQRYRQQAYQWFDTPHQGQI CCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEE SLLFSPQGWRIQGLRDQILPRWYHQWFGVSEDNG EEEECCCCCEECCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKITTVSVCVVCGILPLMILPVLPDTWILAVLFCLACLLCLIPHHYARYAALTLLFFMWG CCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH IFAARQAIWVGNVLPAATQEATVVITATDHMTTHYGRITHLHGKPLFPAVGIVLHGQYLP HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHCCCEEEECCCCCCHHHHHEEECCCCC TEVCAGQQWAMTLKVRAVHGQLNEGGFDSQRYALAQHQPLTGRFLQAKAINPECSLRGRY HHHHCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCHHH LASLRATLAPYPWQQVILALGMGERGAVSQEVKAVMRDTGTAHLMAISGLHIAFAALLAA HHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH GLIRGGQFFLPVRWIRWQTPLLGGILCAICYAWLTGLQPPALRTVAALSVWGGLKLSGRQ HHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEECCCC WSGWQVWCCCLAAIIFADPVAVISQSLWLSAFAVAGLLFWYQWFPAPNGNFPRGLRWLLN CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFL HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH EEWVWYLTDRALAALFYLLNALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTWPAVCL HHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH CGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVII HHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCEEEEEECCCCCCCCCCCCEEEE PWLRWHNLTPEGVILSHEHLDHRGGLRSLQQVWPSMWIRSPLGWQGHLPCFRGEQWQWQG EHHHHCCCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC LTFQAHWPLRESADRGNNRSCVVKVDDGVHSILLTGDIEAGAEQKMLSRYWRHLAATFIQ EEEEECCCCHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC VPHHGSNTSSSLPFIQRVHGEAALASASRYNAWRLPSRKVKQRYRQQAYQWFDTPHQGQI CCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEE SLLFSPQGWRIQGLRDQILPRWYHQWFGVSEDNG EEEECCCCCEECCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 8094880 [H]