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The map label for this gene is ycaR [C]

Identifier: 29142371

GI number: 29142371

Start: 1995899

End: 1996081

Strand: Reverse

Name: ycaR [C]

Synonym: t1947

Alternate gene names: 29142371

Gene position: 1996081-1995899 (Counterclockwise)

Preceding gene: 29142372

Following gene: 29142370

Centisome position: 41.65

GC content: 45.9

Gene sequence:

>183_bases
ATGGATCATCGTCTGCTTGAAATCATCGCCTGCCCGGTATGTAACGGCAAACTCTGGTATAACCAGGAACAGCAAGAATT
AATTTGCAAACTGGATAATCTCGCTTTCCCGTTACGCGACGGCATTCCTGTATTGCTGGAAAATGAAGCTCGCGCCCTGA
CATCTGATGAGAGTAAATCATGA

Upstream 100 bases:

>100_bases
CCTGTTTAGCGCCATGCGTCATGGCTGGGAAATAGACCCTGCACCATAACCGATTATGTTAATATTGAAGGATTCACAAT
CCGGTCCATCTGGAGGAACT

Downstream 100 bases:

>100_bases
GTTTCGTCGTCATCATTCCGGCCCGTTTTTCATCTACCCGACTGCCAGGCAAACCATTAGTGGATATTAATGGTAAACCC
ATGATTGTTCATGTCCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MDHRLLEIIACPVCNGKLWYNQEQQELICKLDNLAFPLRDGIPVLLENEARALTSDESKS

Sequences:

>Translated_60_residues
MDHRLLEIIACPVCNGKLWYNQEQQELICKLDNLAFPLRDGIPVLLENEARALTSDESKS
>Mature_60_residues
MDHRLLEIIACPVCNGKLWYNQEQQELICKLDNLAFPLRDGIPVLLENEARALTSDESKS

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family [H]

Homologues:

Organism=Escherichia coli, GI1787146, Length=60, Percent_Identity=93.3333333333333, Blast_Score=119, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005651 [H]

Pfam domain/function: PF03966 Trm112p [H]

EC number: NA

Molecular weight: Translated: 6856; Mature: 6856

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHRLLEIIACPVCNGKLWYNQEQQELICKLDNLAFPLRDGIPVLLENEARALTSDESKS
CCCCEEEEEECCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MDHRLLEIIACPVCNGKLWYNQEQQELICKLDNLAFPLRDGIPVLLENEARALTSDESKS
CCCCEEEEEECCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA