Click here to switch to the map view.

The map label for this gene is ydaU [H]

Identifier: 29142343

GI number: 29142343

Start: 1963917

End: 1964900

Strand: Reverse

Name: ydaU [H]

Synonym: t1918

Alternate gene names: 29142343

Gene position: 1964900-1963917 (Counterclockwise)

Preceding gene: 29142344

Following gene: 29142342

Centisome position: 41.0

GC content: 46.75

Gene sequence:

>984_bases
ATGAGTATGTCAAATACCGCTGAAATATACAAATTCCCTGCGCCGATACCGACGCAACAGGAGTGCCGTATGGCTGATCT
GGAAAATGGCTATTTACGTTTAGCTAATCAGATCCAGGACGCCTTGTGTATCGTTGAACTATCGGGGCGTGAGTTCCGTG
TTTTGAATGCGATTATCCGGCTGACTTATGGCTGGTCGAAAAAATCAGATCGTATTGCCAACAGCCTCATTGCAGATAAG
ACAACACTGAAGGTAAAGCATGTATCCGAAGCGGTGCTGAGTCTTGCCTATCGTAACATCATTATCCTGCGCCGTATTGG
TCAAACAAGATACATAGGGATTAATACAAACCTGGATAAATGGGCTTATTCCAAGCCACATTGCTCAAAATGTCCGGTGT
CTTTTCCTGATGATGAAATTGCCACATGGATTATTTCTGTACCCGAAACCAGGGATAGTTATACCCGAAAAGGGGGAAGG
GCATCCCCGAAAACGGGGATAGTTATCCCTGAAAACAGGGATAGCGTTTTACCCCATTCAGCCATCCCTGAAAACGGGGA
TAGTTATCCCCGAAAAGAGGGAAGGGCATCCCCGAAAACAGGGAACACCAAAGACATTATTCCAAAGACAAATATAAAAG
ATCTAACCCCCTTTAATCCCCCTAAGGGAAAAGTGAAGTTTGATCCGTTGAGTATTCCTGTTCCCGAATGGCTGAATGCT
GCGTCGTGGAACGAATGGGTCACATACCGCCAGCAATCCGGAAAGCCCATAAAAACCGAACTGACGGTAACAAAAGCTTT
CAGGCTTCTGAAGGAGTGCCTGGATGAAGGCCACGATCCGGTAAACGTCATCAACACAAGCATTGCCAACGGCTACCAGG
GACTATTCAAACCGAAGTTCGCTCTCAACGACCGAAGAGCTGGCAGAGATGTGAACCACATTTCTGCGCCAGACAAAACC
ATTCCTACCGGATTCAGGGGGTAA

Upstream 100 bases:

>100_bases
GCTGGGGTGGGACTGAAAATGACAGCAACCAAAAAGGCGAAAGCCGCGGTGAGGGGTCACCAACGGCTTTCTGGTGCAAA
AACGGTAGGTAATTGCGGAG

Downstream 100 bases:

>100_bases
CGATGAAAAACGTAATCGGTACTGGCAGTGCGCTTGATCGCCTGAAAAGAATTATCCCAGCCAGTGTGCAGCCGAAATTC
TCGACTGCTGATGAGTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MSMSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADK
TTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYTRKGGR
ASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNA
ASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKT
IPTGFRG

Sequences:

>Translated_327_residues
MSMSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADK
TTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYTRKGGR
ASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNA
ASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKT
IPTGFRG
>Mature_326_residues
SMSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKT
TLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYTRKGGRA
SPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAA
SWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTI
PTGFRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787622, Length=120, Percent_Identity=45.8333333333333, Blast_Score=104, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010781 [H]

Pfam domain/function: PF07120 DUF1376 [H]

EC number: NA

Molecular weight: Translated: 36673; Mature: 36542

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIR
CCCCCCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHEEEEEEECCCHHHHHHHHHH
LTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDK
HHCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCHH
WAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYTRKGGRASPKTGIVIPENRDSVLPHS
HCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCC
AIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCC
ASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKF
CCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHCCCCC
ALNDRRAGRDVNHISAPDKTIPTGFRG
CCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SMSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIR
CCCCCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHEEEEEEECCCHHHHHHHHHH
LTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDK
HHCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCHH
WAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYTRKGGRASPKTGIVIPENRDSVLPHS
HCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCC
AIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCC
ASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKF
CCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHCCCCC
ALNDRRAGRDVNHISAPDKTIPTGFRG
CCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]