| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
Click here to switch to the map view.
The map label for this gene is 29142315
Identifier: 29142315
GI number: 29142315
Start: 1945712
End: 1946653
Strand: Reverse
Name: 29142315
Synonym: t1889
Alternate gene names: NA
Gene position: 1946653-1945712 (Counterclockwise)
Preceding gene: 29142316
Following gene: 29142314
Centisome position: 40.62
GC content: 52.97
Gene sequence:
>942_bases ATGATTACTTTTGATCAGGCAACCGTTGATAGCTCCGGTGCCTTTCTCATCGGGGAGCTGGAGCGACTCGACCAGGGGCT GAATCTGCCACTGGTGGGTTATACCTGGACACGTGATATCCAGTTGCGCGAAGACGTCTCTATCGCAGATGACATTTCCA GCTGGACGAATACCAGTTTTGGCGTGGCGGGTTCTGGCGCTAATCCGAATGGTAAAAACTGGGTAGGCAAAGATTCAACT GCCATTGCTGGCGTTAATGTTGATATCAGTAAAGACGGCAATCCGCTGAACCTTTGGGGGATGGAGCTGGGATGGACTGT TGTTGAGCTGGCTGCGGCACAGCAGGTAGGCCGTCCGATCGACACTCAGAAGTACGACGGGATGCAGCTTAAATGGCAGA TGGATAACGACGAACAGGTTTACGTCGGAGACGAAGCGCTTGGTTTGAAAGGTCTGACGAATCTCGTTGGTGTGACGCTG AACAACGCAACGAAGACCTGGGCTAACTCCACCAACGATGAGATCCTCGACAGCGTAAACAGCATTCTGTCGAATGCCTG GGCAGCATCCGGTTATTCCGTCGTGCCTTCTGATCTGCGCATTCCGCCAGAGCAGTATTCATTGCTGGCGAGCCGTAAGG TTTCCGAAGCGGGTAACCAGTCACTGCTGACTTATCTGGCTGTGAACACTATCGCTTTCCACCAGAATGGCGTTCCGCTG GAAATCAAAGCGGTCAAATGGCTGAAAGGGCGCGGGGTTGGCGGTAAAGACCGTATGGTCGCCTACACCAACGATAAGAA ATACGTCCGCTATCCACTGGTTCCGCTGCAAAGCGTTCCTGTTCAGTATCGTGGTCTGTACCAGATTGCGACCTACTACG GCAAGCTCGGTGCGGTTGAGCCAGTGTACAAAGAAACCCTGTCCTACGTGGACGGTATCTGA
Upstream 100 bases:
>100_bases TGACAGGCAAAACAGCCGCGTTACCTGATGCTTTTTTTACGGGGGCCGGTGACGCTAACGGCAACGCAGAAATCTCCTGG AAGATTTAAGGAACAGACGA
Downstream 100 bases:
>100_bases TAACCAGAATGGCCCCGAAAGGGGCCAGAAGGAAACTAAAAATGGCGAAAGAAAAGCTGGTTACCATCCATGTTCACACC CCGTTTACGCTGACGCTCGG
Product: bacteriophage protein
Products: NA
Alternate protein names: Exported Phage Protein
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MITFDQATVDSSGAFLIGELERLDQGLNLPLVGYTWTRDIQLREDVSIADDISSWTNTSFGVAGSGANPNGKNWVGKDST AIAGVNVDISKDGNPLNLWGMELGWTVVELAAAQQVGRPIDTQKYDGMQLKWQMDNDEQVYVGDEALGLKGLTNLVGVTL NNATKTWANSTNDEILDSVNSILSNAWAASGYSVVPSDLRIPPEQYSLLASRKVSEAGNQSLLTYLAVNTIAFHQNGVPL EIKAVKWLKGRGVGGKDRMVAYTNDKKYVRYPLVPLQSVPVQYRGLYQIATYYGKLGAVEPVYKETLSYVDGI
Sequences:
>Translated_313_residues MITFDQATVDSSGAFLIGELERLDQGLNLPLVGYTWTRDIQLREDVSIADDISSWTNTSFGVAGSGANPNGKNWVGKDST AIAGVNVDISKDGNPLNLWGMELGWTVVELAAAQQVGRPIDTQKYDGMQLKWQMDNDEQVYVGDEALGLKGLTNLVGVTL NNATKTWANSTNDEILDSVNSILSNAWAASGYSVVPSDLRIPPEQYSLLASRKVSEAGNQSLLTYLAVNTIAFHQNGVPL EIKAVKWLKGRGVGGKDRMVAYTNDKKYVRYPLVPLQSVPVQYRGLYQIATYYGKLGAVEPVYKETLSYVDGI >Mature_313_residues MITFDQATVDSSGAFLIGELERLDQGLNLPLVGYTWTRDIQLREDVSIADDISSWTNTSFGVAGSGANPNGKNWVGKDST AIAGVNVDISKDGNPLNLWGMELGWTVVELAAAQQVGRPIDTQKYDGMQLKWQMDNDEQVYVGDEALGLKGLTNLVGVTL NNATKTWANSTNDEILDSVNSILSNAWAASGYSVVPSDLRIPPEQYSLLASRKVSEAGNQSLLTYLAVNTIAFHQNGVPL EIKAVKWLKGRGVGGKDRMVAYTNDKKYVRYPLVPLQSVPVQYRGLYQIATYYGKLGAVEPVYKETLSYVDGI
Specific function: Unknown
COG id: COG4834
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34148; Mature: 34148
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITFDQATVDSSGAFLIGELERLDQGLNLPLVGYTWTRDIQLREDVSIADDISSWTNTSF CEECCCCCCCCCCCEEEEEHHHHCCCCCCCEEEEEEECCEEECCCCCHHHHHHHHCCCCC GVAGSGANPNGKNWVGKDSTAIAGVNVDISKDGNPLNLWGMELGWTVVELAAAQQVGRPI CEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHCCCC DTQKYDGMQLKWQMDNDEQVYVGDEALGLKGLTNLVGVTLNNATKTWANSTNDEILDSVN CCCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHH SILSNAWAASGYSVVPSDLRIPPEQYSLLASRKVSEAGNQSLLTYLAVNTIAFHQNGVPL HHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCE EIKAVKWLKGRGVGGKDRMVAYTNDKKYVRYPLVPLQSVPVQYRGLYQIATYYGKLGAVE EEEEEEEECCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCC PVYKETLSYVDGI HHHHHHHHHHCCC >Mature Secondary Structure MITFDQATVDSSGAFLIGELERLDQGLNLPLVGYTWTRDIQLREDVSIADDISSWTNTSF CEECCCCCCCCCCCEEEEEHHHHCCCCCCCEEEEEEECCEEECCCCCHHHHHHHHCCCCC GVAGSGANPNGKNWVGKDSTAIAGVNVDISKDGNPLNLWGMELGWTVVELAAAQQVGRPI CEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHCCCC DTQKYDGMQLKWQMDNDEQVYVGDEALGLKGLTNLVGVTLNNATKTWANSTNDEILDSVN CCCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHH SILSNAWAASGYSVVPSDLRIPPEQYSLLASRKVSEAGNQSLLTYLAVNTIAFHQNGVPL HHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCE EIKAVKWLKGRGVGGKDRMVAYTNDKKYVRYPLVPLQSVPVQYRGLYQIATYYGKLGAVE EEEEEEEECCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCC PVYKETLSYVDGI HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA