Definition Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome.
Accession NC_004631
Length 4,791,961

Click here to switch to the map view.

The map label for this gene is 29142301

Identifier: 29142301

GI number: 29142301

Start: 1936029

End: 1936760

Strand: Reverse

Name: 29142301

Synonym: t1875

Alternate gene names: NA

Gene position: 1936760-1936029 (Counterclockwise)

Preceding gene: 29142302

Following gene: 29142300

Centisome position: 40.42

GC content: 42.49

Gene sequence:

>732_bases
ATGAGTTTAGCGCAGCCTAAATCCGGAGAGCTTTTAGAGATCCTTGGTCCCTCACTCACTCAGGGAGAAAACCTACTCAG
TGAGTTTGAAATTCATGCCGTCATTCGTGACGCCAGGAATGTTCCTGAATATTATCAAGGGCTTTCTATCGAGGGATTAG
CTAAGCTTGTTTTAGGCGAAGTTGAAGAGGGATGTGCCCTTTGTGAAAAGTCATTGGCGATAGCCCCGGACGATTCTGTT
TCGTTTTGTAACTATACGATTGCGTTGAGAAACAAGGGGTATCACGTTAAGCAATACGAGATTATTAAGAGAGCGATCAA
CTCGCGTAATCCTCGAATTCTTTCTGAAGTGGCTATAAATGCTGCGTATTGGGTGGATTTAGATTTGCTGAAAAAGGTAA
TGCCTATGCTTAATGCGATGGAAGTTGCTAAGGCAGACGATTTGCTCAAGTGTAATGAGTCGCTTGATTATCTTATCGAT
CATGAGAATCATTCTCATGACCTTAAGGCGATCGGCCAATTGATGATGACTATTGCTGAAAAGTATCGTTTACGTCTGGC
TGGTGCGCATGCTTTTTATGTCATGAATGAGCTGAACACATTTTTCGTAGAAATTAAAACTGACGACCCAGCACTTTTGT
CAAAAGTGAATAACGACCTTGCCAATGAACTCATCGCTGCTGGTTTGGAAAATTCAGAGTGTGTTGGTTGTTTCCAGGCA
GGAGACTTCTAA

Upstream 100 bases:

>100_bases
ATCGTGCTGTCGTTTTCCAACTTTACCCATTACACTGCAGATACTTTTGAAGGCGTTTTGCCATCAACTTTGATGTCACC
CAGTCAGGAATTACAACTAA

Downstream 100 bases:

>100_bases
TGCCTGTTATGCATAATTGTTTTCTCGAATTAGCCAGAGAATCATTGCAGCACAATGGTGAGCAATGGACACGTAATGCT
ATCAGCAGGTCATACTACGG

Product: bacteriophage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSLAQPKSGELLEILGPSLTQGENLLSEFEIHAVIRDARNVPEYYQGLSIEGLAKLVLGEVEEGCALCEKSLAIAPDDSV
SFCNYTIALRNKGYHVKQYEIIKRAINSRNPRILSEVAINAAYWVDLDLLKKVMPMLNAMEVAKADDLLKCNESLDYLID
HENHSHDLKAIGQLMMTIAEKYRLRLAGAHAFYVMNELNTFFVEIKTDDPALLSKVNNDLANELIAAGLENSECVGCFQA
GDF

Sequences:

>Translated_243_residues
MSLAQPKSGELLEILGPSLTQGENLLSEFEIHAVIRDARNVPEYYQGLSIEGLAKLVLGEVEEGCALCEKSLAIAPDDSV
SFCNYTIALRNKGYHVKQYEIIKRAINSRNPRILSEVAINAAYWVDLDLLKKVMPMLNAMEVAKADDLLKCNESLDYLID
HENHSHDLKAIGQLMMTIAEKYRLRLAGAHAFYVMNELNTFFVEIKTDDPALLSKVNNDLANELIAAGLENSECVGCFQA
GDF
>Mature_242_residues
SLAQPKSGELLEILGPSLTQGENLLSEFEIHAVIRDARNVPEYYQGLSIEGLAKLVLGEVEEGCALCEKSLAIAPDDSVS
FCNYTIALRNKGYHVKQYEIIKRAINSRNPRILSEVAINAAYWVDLDLLKKVMPMLNAMEVAKADDLLKCNESLDYLIDH
ENHSHDLKAIGQLMMTIAEKYRLRLAGAHAFYVMNELNTFFVEIKTDDPALLSKVNNDLANELIAAGLENSECVGCFQAG
DF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27009; Mature: 26878

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAQPKSGELLEILGPSLTQGENLLSEFEIHAVIRDARNVPEYYQGLSIEGLAKLVLGE
CCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHH
VEEGCALCEKSLAIAPDDSVSFCNYTIALRNKGYHVKQYEIIKRAINSRNPRILSEVAIN
HHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
AAYWVDLDLLKKVMPMLNAMEVAKADDLLKCNESLDYLIDHENHSHDLKAIGQLMMTIAE
HHEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCHHHHHHHHHHHHHHH
KYRLRLAGAHAFYVMNELNTFFVEIKTDDPALLSKVNNDLANELIAAGLENSECVGCFQA
HHHHHHCCCHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
GDF
CCC
>Mature Secondary Structure 
SLAQPKSGELLEILGPSLTQGENLLSEFEIHAVIRDARNVPEYYQGLSIEGLAKLVLGE
CCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHH
VEEGCALCEKSLAIAPDDSVSFCNYTIALRNKGYHVKQYEIIKRAINSRNPRILSEVAIN
HHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
AAYWVDLDLLKKVMPMLNAMEVAKADDLLKCNESLDYLIDHENHSHDLKAIGQLMMTIAE
HHEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCHHHHHHHHHHHHHHH
KYRLRLAGAHAFYVMNELNTFFVEIKTDDPALLSKVNNDLANELIAAGLENSECVGCFQA
HHHHHHCCCHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
GDF
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA