| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29142295
Identifier: 29142295
GI number: 29142295
Start: 1932316
End: 1932996
Strand: Reverse
Name: 29142295
Synonym: t1869
Alternate gene names: NA
Gene position: 1932996-1932316 (Counterclockwise)
Preceding gene: 29142296
Following gene: 29142294
Centisome position: 40.34
GC content: 46.55
Gene sequence:
>681_bases ATGAGCAAATATACGGACTTAATTACTAACTATCATGCGACAAAACCTAAATTCGTTGAACACATCGATTTAGTGACCAG GCCGTTAGCTGAAACCTCAGCCGCAATAAATGGGCTAATAAGCGCTTTTGATATTGATTATGCGACAGGAATACAACTCG ATATTCTCGGCCAGTGGATAGGGTTAAGCCGTGTTGTAAGCCAGCCAATAAGCGGTGTCTATTTCAGTTGGGACACTGAC GGACTTGGATATGACCAGGGCGTCTGGCAGGGGCCATATGATCCGGATTCGGGTTATACCTCGCTGAGCGATGAAACCTA TCGCATCGTTCTAAAAACGAAGATAGCAATTAACAACTGGGACGGAAGAAACGACTCCCTGCCTCCCATTCTTGACGCCG CACTGGACGGGTCCGGTCTGAAGATGCAGATCGTCGATAACCAGGATATGACCATAGGTATCTGGGTTTTTCCTGAAACA GATATTTCATCGGTCTCTCTCGAACTTATTGCTGCGATACGACAAGGGTATCTGACGGTAAAGGCCGCTGGTGTATGGGG CGGAAGTATTGAAATACCTTCGGTGGAAACGCCTTCTGAAGGAAACAGGTTTTTTGGGTTTGATATGGATAACGAATATA TCAGCGGGTTTGATGCCGGTTCATGGGGGACATTACTCTGA
Upstream 100 bases:
>100_bases TCGGCAAATCTCCTGAAACCGTTGATGCGGCGAATATTAATATTGCTTACGACGAATCTGCCTCCTGTAAGCCGGAAAAT ATCATTATTACGGTGGCAGC
Downstream 100 bases:
>100_bases TGGCTAAAAATGATTTTAAACCGTTTGCGACGGGTAAGGGTGCTAATGTTACATCACAGCCTGACTGGGAAGCGCTGCCG GCGCTCCTGTCTGGTTTTAC
Product: bacteriophage protein
Products: NA
Alternate protein names: Replication H
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSKYTDLITNYHATKPKFVEHIDLVTRPLAETSAAINGLISAFDIDYATGIQLDILGQWIGLSRVVSQPISGVYFSWDTD GLGYDQGVWQGPYDPDSGYTSLSDETYRIVLKTKIAINNWDGRNDSLPPILDAALDGSGLKMQIVDNQDMTIGIWVFPET DISSVSLELIAAIRQGYLTVKAAGVWGGSIEIPSVETPSEGNRFFGFDMDNEYISGFDAGSWGTLL
Sequences:
>Translated_226_residues MSKYTDLITNYHATKPKFVEHIDLVTRPLAETSAAINGLISAFDIDYATGIQLDILGQWIGLSRVVSQPISGVYFSWDTD GLGYDQGVWQGPYDPDSGYTSLSDETYRIVLKTKIAINNWDGRNDSLPPILDAALDGSGLKMQIVDNQDMTIGIWVFPET DISSVSLELIAAIRQGYLTVKAAGVWGGSIEIPSVETPSEGNRFFGFDMDNEYISGFDAGSWGTLL >Mature_225_residues SKYTDLITNYHATKPKFVEHIDLVTRPLAETSAAINGLISAFDIDYATGIQLDILGQWIGLSRVVSQPISGVYFSWDTDG LGYDQGVWQGPYDPDSGYTSLSDETYRIVLKTKIAINNWDGRNDSLPPILDAALDGSGLKMQIVDNQDMTIGIWVFPETD ISSVSLELIAAIRQGYLTVKAAGVWGGSIEIPSVETPSEGNRFFGFDMDNEYISGFDAGSWGTLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24746; Mature: 24615
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKYTDLITNYHATKPKFVEHIDLVTRPLAETSAAINGLISAFDIDYATGIQLDILGQWI CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEHHHHH GLSRVVSQPISGVYFSWDTDGLGYDQGVWQGPYDPDSGYTSLSDETYRIVLKTKIAINNW HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECC DGRNDSLPPILDAALDGSGLKMQIVDNQDMTIGIWVFPETDISSVSLELIAAIRQGYLTV CCCCCCCCHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHCCEEEE KAAGVWGGSIEIPSVETPSEGNRFFGFDMDNEYISGFDAGSWGTLL EEEEECCCEEECCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCC >Mature Secondary Structure SKYTDLITNYHATKPKFVEHIDLVTRPLAETSAAINGLISAFDIDYATGIQLDILGQWI CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEHHHHH GLSRVVSQPISGVYFSWDTDGLGYDQGVWQGPYDPDSGYTSLSDETYRIVLKTKIAINNW HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECC DGRNDSLPPILDAALDGSGLKMQIVDNQDMTIGIWVFPETDISSVSLELIAAIRQGYLTV CCCCCCCCHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHCCEEEE KAAGVWGGSIEIPSVETPSEGNRFFGFDMDNEYISGFDAGSWGTLL EEEEECCCEEECCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA