Click here to switch to the map view.

The map label for this gene is pqiB [H]

Identifier: 29142283

GI number: 29142283

Start: 1914948

End: 1916588

Strand: Reverse

Name: pqiB [H]

Synonym: t1856

Alternate gene names: 29142283

Gene position: 1916588-1914948 (Counterclockwise)

Preceding gene: 29142284

Following gene: 29142282

Centisome position: 40.0

GC content: 51.19

Gene sequence:

>1641_bases
ATGGAACCTAAAAAAGGGGAAGCCAAAGTACAAAAGGTGAAAAATTGGTCGCCTGTCTGGATATTCCCGATTGTTACTGC
GCTTATCGGAGCCTGGATTCTGTTTTATCACTACAGCCACCAGGGACCGGAAGTTACCTTAATTACCACCAATGCGGAAG
GCATTGAAGGCGGAAAAACGACGATCAAAAGTCGCAGCGTGGATGTCGGCGTGGTTGAAAGCGCGACGCTGACTGACGAT
CTGACCCACGTACAAATCAAAGCGCGGCTTCATTCCGGTATGGAAAAGTTGCTGCATAAAGACTCGGTATTTTGGGTCGT
AAAACCGCAGGTGGGGCGTGAAGGCATAAGCGGGCTTGGGACGTTGTTATCAGGCGCGTATATTGAACTACAACCAGGAA
GTAAGGGCAGTCAGCCGGAAAGCTATCAGCTTCTTGACTCACCGCCGTTGGCGCCGCCCGATGCCAAAGGTATTCGTGTG
ATTCTGGACAGCAAAAAGGCCGGTCAGCTCAGTCCTGGCGATCCCGTTCTGTTCCGGGGCTATCGGGTAGGGTCCGTTGA
AACCAGCTCTTTCGATCCGCAAAAACGGACAATGAGTTATCAGTTGTTCATTAAGGCGCCAAACGATCGATTGGTCACCA
GTAATGTCCGATTCTGGAAAGATAGCGGTATCGCTGTGGATCTGACATCGGCGGGAATGCGCGTGGAAATGGGATCGTTG
ACGACGTTATTTGGCGGCGGCGTGAGTTTTGATGTGCCGGAAGGACTTGAGCAGGGGCAACCCGTCGCCGAAAAAACGGC
GTTTAATCTCTACGACGATCAAAAAAGTATTCAGGATTCGCTGTACACCGATCATATCGATTACCTGATGTTCTTTAAAG
ATTCGGTGCGCGGATTACAACCCGGCGCGCCGCTGGAGTTCCGCGGTATTCGTCTGGGGACGGTAAGCAAAGTGCCTTTC
TTTGCGTCTAATATGCGTCAGGTGTTTAACGACGATTACCGTATTCCTGTGCTGGTGCGCATTGAACCGGAGCGTCTGAA
AGCGCAACTGGGAGAAAATGCGGATGTTGGCGCGCATTTGACGGAACTGCTTAAGCGCGGTTTACGCGCTTCGCTTAAAA
CCGGTAACCTGGTGACCGGGGCGCTGTATGTCGATCTGGACTTTTATCCTAAGGAGCCGCCGATTACCGGACTACGCGAA
TTTGATGGTTATGAAATTATTCCCACCGTCAGCAGCGGCCTGGCGCAAATTCAACAGCGACTGGTGGAAACGTTGGATAA
GATCAACAACCTGCCGCTGAATCCGATGATTGAACAAGCGACCAATACGCTGTCTGAAAGCCAGCGTACTATGCGTCGGT
TGCAAACCACGCTGGATAATATGAACAAGATTACCTCCAGTCAGTCGATGCAGCAGCTTCCGGCGGATATGCAAACGACG
TTACGCGAACTTAACCGCAGTATGCAGGGCTTCCAGCCTGGATCGGCGGCGTATAACAAAATGGTGGCGGATATGCAGCG
TCTCGATCAGGTGCTTCGTGAGTTACAACCGGTGTTGAAAACTCTGAACGAGAAGAGCAACGCGCTGGTATTTGAAGCGA
AGGATAAAAAAGATCCTGAGCCTAAGAGGGCGAAACAATGA

Upstream 100 bases:

>100_bases
GCTTTAGTCGTCATAATGACAATGTTTTCTGCGATGACCTTTGATCCGCGTCTGTCGTGGGATCGTGAATACGAACCAGG
CCATGAGGAGTCCTGATAGC

Downstream 100 bases:

>100_bases
AAAAATGGCTAGTCGTGATAATGGCGTTCTGGCTGGCGTCATGTAGTTCCGGCGGAGAAAATAAAAGCTATTATCAGCTC
CCGATAGCGCAAAGCGGTGT

Product: paraquat-inducible protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MEPKKGEAKVQKVKNWSPVWIFPIVTALIGAWILFYHYSHQGPEVTLITTNAEGIEGGKTTIKSRSVDVGVVESATLTDD
LTHVQIKARLHSGMEKLLHKDSVFWVVKPQVGREGISGLGTLLSGAYIELQPGSKGSQPESYQLLDSPPLAPPDAKGIRV
ILDSKKAGQLSPGDPVLFRGYRVGSVETSSFDPQKRTMSYQLFIKAPNDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSL
TTLFGGGVSFDVPEGLEQGQPVAEKTAFNLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPF
FASNMRQVFNDDYRIPVLVRIEPERLKAQLGENADVGAHLTELLKRGLRASLKTGNLVTGALYVDLDFYPKEPPITGLRE
FDGYEIIPTVSSGLAQIQQRLVETLDKINNLPLNPMIEQATNTLSESQRTMRRLQTTLDNMNKITSSQSMQQLPADMQTT
LRELNRSMQGFQPGSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVFEAKDKKDPEPKRAKQ

Sequences:

>Translated_546_residues
MEPKKGEAKVQKVKNWSPVWIFPIVTALIGAWILFYHYSHQGPEVTLITTNAEGIEGGKTTIKSRSVDVGVVESATLTDD
LTHVQIKARLHSGMEKLLHKDSVFWVVKPQVGREGISGLGTLLSGAYIELQPGSKGSQPESYQLLDSPPLAPPDAKGIRV
ILDSKKAGQLSPGDPVLFRGYRVGSVETSSFDPQKRTMSYQLFIKAPNDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSL
TTLFGGGVSFDVPEGLEQGQPVAEKTAFNLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPF
FASNMRQVFNDDYRIPVLVRIEPERLKAQLGENADVGAHLTELLKRGLRASLKTGNLVTGALYVDLDFYPKEPPITGLRE
FDGYEIIPTVSSGLAQIQQRLVETLDKINNLPLNPMIEQATNTLSESQRTMRRLQTTLDNMNKITSSQSMQQLPADMQTT
LRELNRSMQGFQPGSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVFEAKDKKDPEPKRAKQ
>Mature_546_residues
MEPKKGEAKVQKVKNWSPVWIFPIVTALIGAWILFYHYSHQGPEVTLITTNAEGIEGGKTTIKSRSVDVGVVESATLTDD
LTHVQIKARLHSGMEKLLHKDSVFWVVKPQVGREGISGLGTLLSGAYIELQPGSKGSQPESYQLLDSPPLAPPDAKGIRV
ILDSKKAGQLSPGDPVLFRGYRVGSVETSSFDPQKRTMSYQLFIKAPNDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSL
TTLFGGGVSFDVPEGLEQGQPVAEKTAFNLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPF
FASNMRQVFNDDYRIPVLVRIEPERLKAQLGENADVGAHLTELLKRGLRASLKTGNLVTGALYVDLDFYPKEPPITGLRE
FDGYEIIPTVSSGLAQIQQRLVETLDKINNLPLNPMIEQATNTLSESQRTMRRLQTTLDNMNKITSSQSMQQLPADMQTT
LRELNRSMQGFQPGSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVFEAKDKKDPEPKRAKQ

Specific function: Unknown

COG id: COG3008

COG function: function code R; Paraquat-inducible protein B

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiB family [H]

Homologues:

Organism=Escherichia coli, GI1787184, Length=546, Percent_Identity=89.3772893772894, Blast_Score=1008, Evalue=0.0,
Organism=Escherichia coli, GI87081984, Length=313, Percent_Identity=29.7124600638978, Blast_Score=162, Evalue=6e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 60640; Mature: 60640

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPKKGEAKVQKVKNWSPVWIFPIVTALIGAWILFYHYSHQGPEVTLITTNAEGIEGGKT
CCCCCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCH
TIKSRSVDVGVVESATLTDDLTHVQIKARLHSGMEKLLHKDSVFWVVKPQVGREGISGLG
HHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
TLLSGAYIELQPGSKGSQPESYQLLDSPPLAPPDAKGIRVILDSKKAGQLSPGDPVLFRG
HHHCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEE
YRVGSVETSSFDPQKRTMSYQLFIKAPNDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSL
EEECCEECCCCCCHHHCEEEEEEEECCCCCEEECCCEEEECCCCEEEEECCCCEEECCCE
TTLFGGGVSFDVPEGLEQGQPVAEKTAFNLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQ
EEEECCCCCCCCCCCHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PGAPLEFRGIRLGTVSKVPFFASNMRQVFNDDYRIPVLVRIEPERLKAQLGENADVGAHL
CCCCCEECCEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEECHHHHHHHCCCCCCCHHHH
TELLKRGLRASLKTGNLVTGALYVDLDFYPKEPPITGLREFDGYEIIPTVSSGLAQIQQR
HHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCHHHCCCEEEEHHHHHHHHHHHHH
LVETLDKINNLPLNPMIEQATNTLSESQRTMRRLQTTLDNMNKITSSQSMQQLPADMQTT
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LRELNRSMQGFQPGSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVFEAKDKKDPE
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
PKRAKQ
CCCCCC
>Mature Secondary Structure
MEPKKGEAKVQKVKNWSPVWIFPIVTALIGAWILFYHYSHQGPEVTLITTNAEGIEGGKT
CCCCCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCH
TIKSRSVDVGVVESATLTDDLTHVQIKARLHSGMEKLLHKDSVFWVVKPQVGREGISGLG
HHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
TLLSGAYIELQPGSKGSQPESYQLLDSPPLAPPDAKGIRVILDSKKAGQLSPGDPVLFRG
HHHCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEE
YRVGSVETSSFDPQKRTMSYQLFIKAPNDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSL
EEECCEECCCCCCHHHCEEEEEEEECCCCCEEECCCEEEECCCCEEEEECCCCEEECCCE
TTLFGGGVSFDVPEGLEQGQPVAEKTAFNLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQ
EEEECCCCCCCCCCCHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PGAPLEFRGIRLGTVSKVPFFASNMRQVFNDDYRIPVLVRIEPERLKAQLGENADVGAHL
CCCCCEECCEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEECHHHHHHHCCCCCCCHHHH
TELLKRGLRASLKTGNLVTGALYVDLDFYPKEPPITGLREFDGYEIIPTVSSGLAQIQQR
HHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCHHHCCCEEEEHHHHHHHHHHHHH
LVETLDKINNLPLNPMIEQATNTLSESQRTMRRLQTTLDNMNKITSSQSMQQLPADMQTT
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LRELNRSMQGFQPGSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVFEAKDKKDPE
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
PKRAKQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7751275 [H]