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The map label for this gene is ycbZ [H]

Identifier: 29142279

GI number: 29142279

Start: 1911520

End: 1913280

Strand: Direct

Name: ycbZ [H]

Synonym: t1852

Alternate gene names: 29142279

Gene position: 1911520-1913280 (Clockwise)

Preceding gene: 29142277

Following gene: 29142280

Centisome position: 39.89

GC content: 53.66

Gene sequence:

>1761_bases
TTGACCATTACGAAACTTGCATGGCGTGATCTGGTTCCGGATAGCGAAAGCTATCAGGAGATATTTGCACAGCCACACGC
GACTGACGAAAACGACACCTTACTCAGTGATACTCAGCCACGACTGCAATTTGCGCTTGAGCAACTTATACAGCCGTGGG
CATCATCCTCTTTTATGCTGACTAAAGCGCCTGAAGAGCAAGAGTATCTCACTTTACTTTCAGATGCCGTCCGCGCTCTG
CAAACCGATGCCGGACAATTAACCGGCGGACATTATGACGTTTCCGGGCATACTGTTCATTACCGCGCCGCGCAGAATGC
GCAAGACAACTTTGCCACCGTCACACAAGTCGTCAGCGCTGACTGGGTCGAAGCCGAACAGCTCTTTGGTTGCCTGCGGC
AGTATAACGGCGACATTACCCTGCAACCGGGACTGGTTCATCAGGCGAACGGCGGCGTGCTGATTATTTCCTTACGAACC
CTTCTGGCGCAGCCGTTACTATGGATGCGTCTGAAAGCCATCGTTAGCCGCGAGCGTTTTGACTGGGTGGCCTTTGACGA
GTCGCGTCCATTACCGGTCTCCGTGCCATCAATGCCGCTCAAACTGAAGGTGATTCTGGTTGGCGAACGTGAATCACTGG
CTGATTTTCAGGAGATGGAACCGGAGCTCGCGGAACAGGCTATCTACAGTGAATTTGAAGACAATTTACAGATAGCGGAC
GCAGAAGCTATGACCCTGTGGTGTCAATGGGTGACGCGTATCGCTTTACGCGATAATTTGCCCCCTCCGGCACCGGACGC
CTGGCCCGTCCTGATACGCGAGGCTGTGCGCTATACCGGCGAACAGGATACGCTGCCTCTTTGCCCACTGTGGATAGCCC
GCCAGTTTAAGGAGGCGTCGCCTTTATGCGAAGGCGATACCTGCGGCGCAGAAGCGCTCAGTCTGATGCTTGCCCGACGC
GAATGGCGAGAAGGCTTTCTGGCGGAGCGGATGCAAGGCGAGATTCTGCAAGAGCAGATCCTGATTGAAACCGAAGGCGA
ACGCGTTGGACAAATCAATGCGCTTTCCGTCATTGAGTTTCCCGGACATCCGCGCGCCTTTGGCGAACCGTCGCGAATTA
GCTGTGTTGTGCATATCGGCGATGGCGAATTTAACGATATTGAGCGCAAGGCCGAACTTGGCGGAAATATCCACGCTAAG
GGAATGATGATTATGCAGGCCTTCCTGATGTCGGAGTTGCAGCTGGAGCAACAAATTCCCTTCTCTGCCTCGTTAACCTT
TGAGCAGTCCTACAGCGAAGTGGATGGCGATAGCGCCTCAATGGCGGAATTATGTGCGCTCATCAGCGCGCTGGCCAATG
TGCCAGTGAATCAAAATATTGCGATTACCGGCTCGGTCGATCAGTTTGGTCGCGCGCAACCAGTGGGCGGGCTAAACGAA
AAAATTGAAGGTTTCTTCGCCATCTGCGAGCAGCGGGAATTAAACGGTAAACAGGGCGTGATTATCCCTGCCGCCAATGT
CCGCCATCTCAGTCTTAAATCTGAACTGCTGCAAGCGGTTAAAGAAGAGAAGTTCACTATCTGGGCGGTAGACGACGTGA
CCGACGCCTTACCGCTACTGTTAAATCTGGTGTGGGATGGCGAAGGTCAAACGACGTTGATGCAGACTATCCAGGAGCGT
ATCGCGCAGGCGACGCAACAGGAAGGCCGTCATCGTTTCCCGTGGCCATTACGTTGGCTGAACGCTTTTATTCCGAACTG
A

Upstream 100 bases:

>100_bases
TTACACGTCTTCATATTACTTTGCATTCGCTTTCCGCGTGTGCAGCGTGACGGGTTAGGCTATAATCCCCCCTTTTACAA
CAGACTAAAAAACCTCAACT

Downstream 100 bases:

>100_bases
TCGGACTTGTTCAGCGTACACGTGTTAGCTATCCTGCGTGCTTCAATAAAATAAGGTTTACATAAAACATGGTAGATAAA
CGCGAATCCTATACAAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 586; Mature: 585

Protein sequence:

>586_residues
MTITKLAWRDLVPDSESYQEIFAQPHATDENDTLLSDTQPRLQFALEQLIQPWASSSFMLTKAPEEQEYLTLLSDAVRAL
QTDAGQLTGGHYDVSGHTVHYRAAQNAQDNFATVTQVVSADWVEAEQLFGCLRQYNGDITLQPGLVHQANGGVLIISLRT
LLAQPLLWMRLKAIVSRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELAEQAIYSEFEDNLQIAD
AEAMTLWCQWVTRIALRDNLPPPAPDAWPVLIREAVRYTGEQDTLPLCPLWIARQFKEASPLCEGDTCGAEALSLMLARR
EWREGFLAERMQGEILQEQILIETEGERVGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFNDIERKAELGGNIHAK
GMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISALANVPVNQNIAITGSVDQFGRAQPVGGLNE
KIEGFFAICEQRELNGKQGVIIPAANVRHLSLKSELLQAVKEEKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQER
IAQATQQEGRHRFPWPLRWLNAFIPN

Sequences:

>Translated_586_residues
MTITKLAWRDLVPDSESYQEIFAQPHATDENDTLLSDTQPRLQFALEQLIQPWASSSFMLTKAPEEQEYLTLLSDAVRAL
QTDAGQLTGGHYDVSGHTVHYRAAQNAQDNFATVTQVVSADWVEAEQLFGCLRQYNGDITLQPGLVHQANGGVLIISLRT
LLAQPLLWMRLKAIVSRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELAEQAIYSEFEDNLQIAD
AEAMTLWCQWVTRIALRDNLPPPAPDAWPVLIREAVRYTGEQDTLPLCPLWIARQFKEASPLCEGDTCGAEALSLMLARR
EWREGFLAERMQGEILQEQILIETEGERVGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFNDIERKAELGGNIHAK
GMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISALANVPVNQNIAITGSVDQFGRAQPVGGLNE
KIEGFFAICEQRELNGKQGVIIPAANVRHLSLKSELLQAVKEEKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQER
IAQATQQEGRHRFPWPLRWLNAFIPN
>Mature_585_residues
TITKLAWRDLVPDSESYQEIFAQPHATDENDTLLSDTQPRLQFALEQLIQPWASSSFMLTKAPEEQEYLTLLSDAVRALQ
TDAGQLTGGHYDVSGHTVHYRAAQNAQDNFATVTQVVSADWVEAEQLFGCLRQYNGDITLQPGLVHQANGGVLIISLRTL
LAQPLLWMRLKAIVSRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELAEQAIYSEFEDNLQIADA
EAMTLWCQWVTRIALRDNLPPPAPDAWPVLIREAVRYTGEQDTLPLCPLWIARQFKEASPLCEGDTCGAEALSLMLARRE
WREGFLAERMQGEILQEQILIETEGERVGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFNDIERKAELGGNIHAKG
MMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISALANVPVNQNIAITGSVDQFGRAQPVGGLNEK
IEGFFAICEQRELNGKQGVIIPAANVRHLSLKSELLQAVKEEKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQERI
AQATQQEGRHRFPWPLRWLNAFIPN

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=586, Percent_Identity=85.6655290102389, Blast_Score=1036, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.-

Molecular weight: Translated: 65546; Mature: 65415

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITKLAWRDLVPDSESYQEIFAQPHATDENDTLLSDTQPRLQFALEQLIQPWASSSFML
CCCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
TKAPEEQEYLTLLSDAVRALQTDAGQLTGGHYDVSGHTVHYRAAQNAQDNFATVTQVVSA
ECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEECCCCCCHHHHHHHHHHH
DWVEAEQLFGCLRQYNGDITLQPGLVHQANGGVLIISLRTLLAQPLLWMRLKAIVSRERF
HHHHHHHHHHHHHHHCCCEEECCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHC
DWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELAEQAIYSEFEDNLQIAD
CEEEECCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEC
AEAMTLWCQWVTRIALRDNLPPPAPDAWPVLIREAVRYTGEQDTLPLCPLWIARQFKEAS
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
PLCEGDTCGAEALSLMLARREWREGFLAERMQGEILQEQILIETEGERVGQINALSVIEF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEEC
PGHPRAFGEPSRISCVVHIGDGEFNDIERKAELGGNIHAKGMMIMQAFLMSELQLEQQIP
CCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCC
FSASLTFEQSYSEVDGDSASMAELCALISALANVPVNQNIAITGSVDQFGRAQPVGGLNE
CCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCCHH
KIEGFFAICEQRELNGKQGVIIPAANVRHLSLKSELLQAVKEEKFTIWAVDDVTDALPLL
HHHHHHHHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHH
LNLVWDGEGQTTLMQTIQERIAQATQQEGRHRFPWPLRWLNAFIPN
HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
TITKLAWRDLVPDSESYQEIFAQPHATDENDTLLSDTQPRLQFALEQLIQPWASSSFML
CCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
TKAPEEQEYLTLLSDAVRALQTDAGQLTGGHYDVSGHTVHYRAAQNAQDNFATVTQVVSA
ECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEECCCCCCHHHHHHHHHHH
DWVEAEQLFGCLRQYNGDITLQPGLVHQANGGVLIISLRTLLAQPLLWMRLKAIVSRERF
HHHHHHHHHHHHHHHCCCEEECCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHC
DWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELAEQAIYSEFEDNLQIAD
CEEEECCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEC
AEAMTLWCQWVTRIALRDNLPPPAPDAWPVLIREAVRYTGEQDTLPLCPLWIARQFKEAS
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
PLCEGDTCGAEALSLMLARREWREGFLAERMQGEILQEQILIETEGERVGQINALSVIEF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEEC
PGHPRAFGEPSRISCVVHIGDGEFNDIERKAELGGNIHAKGMMIMQAFLMSELQLEQQIP
CCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCC
FSASLTFEQSYSEVDGDSASMAELCALISALANVPVNQNIAITGSVDQFGRAQPVGGLNE
CCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCCHH
KIEGFFAICEQRELNGKQGVIIPAANVRHLSLKSELLQAVKEEKFTIWAVDDVTDALPLL
HHHHHHHHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHH
LNLVWDGEGQTTLMQTIQERIAQATQQEGRHRFPWPLRWLNAFIPN
HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]