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The map label for this gene is yccF [H]

Identifier: 29142273

GI number: 29142273

Start: 1905467

End: 1905913

Strand: Direct

Name: yccF [H]

Synonym: t1846

Alternate gene names: 29142273

Gene position: 1905467-1905913 (Clockwise)

Preceding gene: 29142271

Following gene: 29142274

Centisome position: 39.76

GC content: 51.9

Gene sequence:

>447_bases
ATGCGTACCGTTCTGAATATTTTAAACTTTGTACTGGGCGGCTTTGCCACTACGCTGGCCTGGCTGCTGGCGACGCTGGT
CAGTATTGTGCTTATTTTTACCCTGCCGTTGACCCGCTCCTGCTGGGAGATAACCAAACTGTCCCTGTTCCCTTACGGTA
ATGAAGCCATTCACGTTGACGAACTTAATCCGGCGGCAAAAAGCGTATTAATGAATACTGGCGGTACCTTGCTGAATATT
TTCTGGTTACTTTTTTTCGGCTGGTGGCTATGCCTGATGCACATTGCCTCCGGTATCGCGCAGTGTGTCACTATCATCGG
GATACCTGTCGGTATTGCGAACTTTAAAATTGCCGCGATTGCGCTTTGGCCTGTCGGTCGCCGCGTCGTCTCTGTAGAAA
CCGCTCGCGCCGCGCGAGAAGCTAACGCGCGCCGCCGTTTTGAATGA

Upstream 100 bases:

>100_bases
GATGTGCTTATCAGTGTAACCGCCAGAGAAAACGTGCTCCAGTCTAAAAAAACGTTACAATTGCCCGCAGTAATAGAAAA
CCGGAATGAACTGAGGGTTT

Downstream 100 bases:

>100_bases
TCGGGACAAATAGCCTTTATGTTAAGTCCGTTGATTCGCCGTTATACCTGGAACAGTACCTGGCTGTATTACATCCGCAT
TTTTATCGCTCTGTGCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MRTVLNILNFVLGGFATTLAWLLATLVSIVLIFTLPLTRSCWEITKLSLFPYGNEAIHVDELNPAAKSVLMNTGGTLLNI
FWLLFFGWWLCLMHIASGIAQCVTIIGIPVGIANFKIAAIALWPVGRRVVSVETARAAREANARRRFE

Sequences:

>Translated_148_residues
MRTVLNILNFVLGGFATTLAWLLATLVSIVLIFTLPLTRSCWEITKLSLFPYGNEAIHVDELNPAAKSVLMNTGGTLLNI
FWLLFFGWWLCLMHIASGIAQCVTIIGIPVGIANFKIAAIALWPVGRRVVSVETARAAREANARRRFE
>Mature_148_residues
MRTVLNILNFVLGGFATTLAWLLATLVSIVLIFTLPLTRSCWEITKLSLFPYGNEAIHVDELNPAAKSVLMNTGGTLLNI
FWLLFFGWWLCLMHIASGIAQCVTIIGIPVGIANFKIAAIALWPVGRRVVSVETARAAREANARRRFE

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787195, Length=148, Percent_Identity=92.5675675675676, Blast_Score=253, Evalue=5e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005185 [H]

Pfam domain/function: PF03733 DUF307 [H]

EC number: NA

Molecular weight: Translated: 16371; Mature: 16371

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVLNILNFVLGGFATTLAWLLATLVSIVLIFTLPLTRSCWEITKLSLFPYGNEAIHVD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEC
ELNPAAKSVLMNTGGTLLNIFWLLFFGWWLCLMHIASGIAQCVTIIGIPVGIANFKIAAI
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHE
ALWPVGRRVVSVETARAAREANARRRFE
EECCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRTVLNILNFVLGGFATTLAWLLATLVSIVLIFTLPLTRSCWEITKLSLFPYGNEAIHVD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEC
ELNPAAKSVLMNTGGTLLNIFWLLFFGWWLCLMHIASGIAQCVTIIGIPVGIANFKIAAI
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHE
ALWPVGRRVVSVETARAAREANARRRFE
EECCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2542273; 7984428 [H]