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The map label for this gene is cbpA [H]

Identifier: 29142239

GI number: 29142239

Start: 1870805

End: 1871725

Strand: Direct

Name: cbpA [H]

Synonym: t1808

Alternate gene names: 29142239

Gene position: 1870805-1871725 (Clockwise)

Preceding gene: 29142233

Following gene: 29142240

Centisome position: 39.04

GC content: 53.42

Gene sequence:

>921_bases
ATGGAACTTAAGGATTATTACGCCATTATGGGCGTGAAACCGACGGACGATCTCAAGACGATTAAGACCGCCTATCGCCG
ACTGGCCCGCAAGTACCATCCAGATGTCAGCAAAGAACCCGATGCCGAAGCCCGTTTCAAAGAGGTTGCTGAAGCATGGG
AAGTGCTGAGTGATGAGCAACGGCGCGCCGAGTATGACCAGTTATGGCAACACCGTAACGATCCACAATTTAATCGCCAG
TTCCAGCAACACGAAGGCCAGCCGTATAACGCCGAAGATTTTGATGATATTTTCTCGTCTATTTTTGGTCAGCACGGTCG
TCATTCGCACCACCGCCACGCCGCACGCGGTCATGATATCGAAATTGAAGTGGCGGTATTCCTGGAAGAAACGCTGGAAG
AGCACCAGCGTACGATTAGCTATTCCGTCCCCGTTTATAACGCGTTCGGCCTGGTGGAGCGGGAAATTCCCAAAACATTG
AATGTGAAAATCCCGGCTGGCGTCAGCAACGGGCAACGAATCAGACTGAAAGGCCAGGGCACGCCGGGGGAAAACGGCGG
ACCTAATGGCGATTTATGGCTCGTTATCCATATTGCCCCGCATCCGCTCTTTGATATCGTCAATCAGGATCTGGAAGTCG
TCCTTCCGCTTGCCCCATGGGAGGCGGCGCTCGGCGCTAAGGTGTCTGTGCCAACGCTTAAAGAGCGTATTTTGCTGACC
ATTCCCCCCGGCAGCCAGGCAGGTCAGCGGCTGCGTATCAAAGGAAAAGGATTAGCCAGTAAAAAGCACACTGGCGATCT
CTATGCCATCATCAAAATCGTTATGCCGCCGAAACCTGACGAGAAAACAGCTGCCCTGTGGCAACAACTGGCGGACGCGC
AGTCGTCCTTTGACCCACGCCAGCAATGGGGGAAAGCATAA

Upstream 100 bases:

>100_bases
AACTGGTGTTTTCATACGCACTTTTCAGGTTTACCCTACACTTAGTGGAGAAACCTTTTTGGGGTCCCTTCTGTATGTAT
TGATTTAGCGAGATGATGCT

Downstream 100 bases:

>100_bases
TGGCTAACATCACTGTCACCTTTACCATCACCGAATTTTGTTTGCACACCGGCGTGACGGAAGAGGAGCTAAACGAAATC
GTCGGACTTGGCGTAATTGA

Product: curved DNA-binding protein CbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQ
FQQHEGQPYNAEDFDDIFSSIFGQHGRHSHHRHAARGHDIEIEVAVFLEETLEEHQRTISYSVPVYNAFGLVEREIPKTL
NVKIPAGVSNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVNQDLEVVLPLAPWEAALGAKVSVPTLKERILLT
IPPGSQAGQRLRIKGKGLASKKHTGDLYAIIKIVMPPKPDEKTAALWQQLADAQSSFDPRQQWGKA

Sequences:

>Translated_306_residues
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQ
FQQHEGQPYNAEDFDDIFSSIFGQHGRHSHHRHAARGHDIEIEVAVFLEETLEEHQRTISYSVPVYNAFGLVEREIPKTL
NVKIPAGVSNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVNQDLEVVLPLAPWEAALGAKVSVPTLKERILLT
IPPGSQAGQRLRIKGKGLASKKHTGDLYAIIKIVMPPKPDEKTAALWQQLADAQSSFDPRQQWGKA
>Mature_306_residues
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQ
FQQHEGQPYNAEDFDDIFSSIFGQHGRHSHHRHAARGHDIEIEVAVFLEETLEEHQRTISYSVPVYNAFGLVEREIPKTL
NVKIPAGVSNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVNQDLEVVLPLAPWEAALGAKVSVPTLKERILLT
IPPGSQAGQRLRIKGKGLASKKHTGDLYAIIKIVMPPKPDEKTAALWQQLADAQSSFDPRQQWGKA

Specific function: DNA-binding protein that preferentially recognizes a curved DNA sequence. It is probably a functional analog of DnaJ; displays overlapping activities with DnaJ, but functions under different conditions, probably acting as a molecular chaperone in an adapt

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI205360840, Length=356, Percent_Identity=26.9662921348315, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI205360838, Length=356, Percent_Identity=26.9662921348315, Blast_Score=105, Evalue=7e-23,
Organism=Homo sapiens, GI6631085, Length=318, Percent_Identity=28.6163522012579, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI5453690, Length=338, Percent_Identity=26.6272189349112, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI201862587, Length=347, Percent_Identity=27.0893371757925, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI56549115, Length=347, Percent_Identity=27.0893371757925, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI201862518, Length=347, Percent_Identity=27.0893371757925, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI39204547, Length=313, Percent_Identity=26.517571884984, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI7706495, Length=297, Percent_Identity=27.6094276094276, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI9558755, Length=65, Percent_Identity=56.9230769230769, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI194328760, Length=125, Percent_Identity=37.6, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI194328758, Length=125, Percent_Identity=37.6, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI4504511, Length=135, Percent_Identity=34.0740740740741, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI72534740, Length=150, Percent_Identity=31.3333333333333, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI56687498, Length=63, Percent_Identity=46.031746031746, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI194306642, Length=106, Percent_Identity=36.7924528301887, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI194306640, Length=106, Percent_Identity=36.7924528301887, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1787235, Length=306, Percent_Identity=88.2352941176471, Blast_Score=570, Evalue=1e-164,
Organism=Escherichia coli, GI1786197, Length=356, Percent_Identity=34.5505617977528, Blast_Score=177, Evalue=9e-46,
Organism=Caenorhabditis elegans, GI17553096, Length=343, Percent_Identity=25.3644314868805, Blast_Score=107, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17553098, Length=343, Percent_Identity=25.6559766763848, Blast_Score=107, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI17534355, Length=333, Percent_Identity=30.03003003003, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI212645553, Length=347, Percent_Identity=26.2247838616715, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17507263, Length=62, Percent_Identity=50, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115532476, Length=74, Percent_Identity=43.2432432432432, Blast_Score=64, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6324265, Length=253, Percent_Identity=29.6442687747036, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6320888, Length=103, Percent_Identity=40.7766990291262, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI85726398, Length=355, Percent_Identity=30.7042253521127, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24658562, Length=344, Percent_Identity=31.1046511627907, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24658555, Length=344, Percent_Identity=31.1046511627907, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI19920464, Length=314, Percent_Identity=26.7515923566879, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI18858081, Length=279, Percent_Identity=27.5985663082437, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI45549272, Length=68, Percent_Identity=60.2941176470588, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI45552813, Length=68, Percent_Identity=60.2941176470588, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI45552811, Length=135, Percent_Identity=41.4814814814815, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24654066, Length=100, Percent_Identity=42, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24654070, Length=100, Percent_Identity=42, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24654068, Length=100, Percent_Identity=42, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24654072, Length=100, Percent_Identity=42, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24668492, Length=64, Percent_Identity=46.875, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24646562, Length=62, Percent_Identity=50, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24646560, Length=62, Percent_Identity=50, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24646558, Length=62, Percent_Identity=50, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24646556, Length=62, Percent_Identity=50, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI21357547, Length=62, Percent_Identity=50, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 34694; Mature: 34694

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQ
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHH
RRAEYDQLWQHRNDPQFNRQFQQHEGQPYNAEDFDDIFSSIFGQHGRHSHHRHAARGHDI
HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCE
EIEVAVFLEETLEEHQRTISYSVPVYNAFGLVEREIPKTLNVKIPAGVSNGQRIRLKGQG
EEEHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECC
TPGENGGPNGDLWLVIHIAPHPLFDIVNQDLEVVLPLAPWEAALGAKVSVPTLKERILLT
CCCCCCCCCCCEEEEEEECCCHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCCCCCEEEE
IPPGSQAGQRLRIKGKGLASKKHTGDLYAIIKIVMPPKPDEKTAALWQQLADAQSSFDPR
ECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHH
QQWGKA
HHCCCC
>Mature Secondary Structure
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQ
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHH
RRAEYDQLWQHRNDPQFNRQFQQHEGQPYNAEDFDDIFSSIFGQHGRHSHHRHAARGHDI
HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCE
EIEVAVFLEETLEEHQRTISYSVPVYNAFGLVEREIPKTLNVKIPAGVSNGQRIRLKGQG
EEEHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECC
TPGENGGPNGDLWLVIHIAPHPLFDIVNQDLEVVLPLAPWEAALGAKVSVPTLKERILLT
CCCCCCCCCCCEEEEEEECCCHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCCCCCEEEE
IPPGSQAGQRLRIKGKGLASKKHTGDLYAIIKIVMPPKPDEKTAALWQQLADAQSSFDPR
ECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHH
QQWGKA
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA