| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is msyB [H]
Identifier: 29142199
GI number: 29142199
Start: 1829742
End: 1830116
Strand: Direct
Name: msyB [H]
Synonym: t1767
Alternate gene names: 29142199
Gene position: 1829742-1830116 (Clockwise)
Preceding gene: 29142198
Following gene: 29142203
Centisome position: 38.18
GC content: 51.73
Gene sequence:
>375_bases ATGACCATGTATGCCACGCTGGAAGAAGCTATCGATGCAGCCCGGGAAGAATTTCTGGCTGACCATCCAGGCCTCGAACA AGACGAAGCGAATGTGCAGCAGTTCAACGTTCAGAAATATGTACTGCAGGATGGGGACATCATGTGGCAGGTCGAATTTT TCGCCGATGAAGGTGAAGATGGCGAATGTCTGCCGATGCTGAGTGGTGAAGCCGCACAGAGCGTGTTTGACGGCGATTAT GATGAGATAGAGATCCGCCAGGAATGGCAGGAAGAGAATACTTTGCATGAATGGGATGAAGGGGAATTCCAGCTTGAACC CCCGCTTGATACCGAGGAAGGCCGTACTGCGGCAGACGAATGGGATGAGCGTTAA
Upstream 100 bases:
>100_bases CAGACTGGCAATAGAATGATTTTTGCGCTTTCATACTTGCAATATCACAGAATCAGCTATTCTTTCCCTAAATACCTCGT CAAATCAAAGGGAGACACTG
Downstream 100 bases:
>100_bases TTACTCATAAGGCCCGTGGTGAATATCGAGCGGCAGTAGCAGTGTATCGAAGATCAGTGAGAAGGGCAGATCGAGGATAG TGATATAGCGCCATGCGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MTMYATLEEAIDAAREEFLADHPGLEQDEANVQQFNVQKYVLQDGDIMWQVEFFADEGEDGECLPMLSGEAAQSVFDGDY DEIEIRQEWQEENTLHEWDEGEFQLEPPLDTEEGRTAADEWDER
Sequences:
>Translated_124_residues MTMYATLEEAIDAAREEFLADHPGLEQDEANVQQFNVQKYVLQDGDIMWQVEFFADEGEDGECLPMLSGEAAQSVFDGDY DEIEIRQEWQEENTLHEWDEGEFQLEPPLDTEEGRTAADEWDER >Mature_123_residues TMYATLEEAIDAAREEFLADHPGLEQDEANVQQFNVQKYVLQDGDIMWQVEFFADEGEDGECLPMLSGEAAQSVFDGDYD EIEIRQEWQEENTLHEWDEGEFQLEPPLDTEEGRTAADEWDER
Specific function: Could participate in the normal pathway of protein export [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081827, Length=124, Percent_Identity=92.741935483871, Blast_Score=234, Evalue=1e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14397; Mature: 14266
Theoretical pI: Translated: 3.42; Mature: 3.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMYATLEEAIDAAREEFLADHPGLEQDEANVQQFNVQKYVLQDGDIMWQVEFFADEGED CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEECCCCEEEEEEEEECCCCC GECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGEFQLEPPLDTEEGRTAADE CCEECCCCCHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCC WDER CCCC >Mature Secondary Structure TMYATLEEAIDAAREEFLADHPGLEQDEANVQQFNVQKYVLQDGDIMWQVEFFADEGED CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEECCCCEEEEEEEEECCCCC GECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGEFQLEPPLDTEEGRTAADE CCEECCCCCHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCC WDER CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1537791; 8905232; 9278503 [H]