| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is yceB [H]
Identifier: 29142189
GI number: 29142189
Start: 1820616
End: 1821242
Strand: Direct
Name: yceB [H]
Synonym: t1756
Alternate gene names: 29142189
Gene position: 1820616-1821242 (Clockwise)
Preceding gene: 29142188
Following gene: 29142190
Centisome position: 37.99
GC content: 46.73
Gene sequence:
>627_bases ATGTCCGCTGGCGCGACATGCTGCTTTGTGTCAAGATTAGGGCACAGGCAACATGCTAAGGAACGCCATGAAAAAGTTTT TTTTGCCGCTGCGCTGGTAGTTAGCGGCCTGTTAGTGGGTTGTAATCAACTTACGCAATACACCATTAGCGAACAAGAAA TCAATCAAGCGCTTGAAAAACGGAATAATTTCTCAAAAGATATTGGTCTGCCTGGCATTGCCGACGCGCATATCGTATTG ACTAACCTTGCCAGCCAGATTGGTCGGGAAGAGCCTAATAAAGTCACCCTTACTGGCGATGCCAGGCTGGATATGAATTC CCTGTTTGGCAGTCAAAAAGCGACGATGAAACTCAAGCTAAAAGCCCTGCCGGTCTTTGATAAAGAAAAAGGCGCCATCT ATCTTCAGGAGATGGAAGTAGTAGACGCCACCGTGACGCCGGAGAAAATGCAATCAGTGCTACAAACGCTCCTGCCCTAT TTAAATCAGTCTTTACGTAGCTACTTTAACCAGCGGCCCGCTTACGTGTTGCGTGAGGACAGTAGTAAAGGCGAAGCGTT AGCGAAGAAACTCGCGAAAGGCATTGAAGTTAAACCTGGTGAAATCGTTATTCCTTTCACCAATTGA
Upstream 100 bases:
>100_bases TAAGCAGACGCAAATTAATTTACTCTCCTCAATGGCTATCTAACGCCCGCCAGGCGGCAACCCTTTCTTGCCGCCTTTTT CAGCTTTTTTTAGTGGCGCC
Downstream 100 bases:
>100_bases TTTCGGAGGGCGCGCTCGCGCCCTTTTTTTACGTGCAAACGAAAACGTTTCCGCTTATCCTTTGTTTCCGGCAAAAAGAC TATTCCTCAGCCGGAGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MSAGATCCFVSRLGHRQHAKERHEKVFFAAALVVSGLLVGCNQLTQYTISEQEINQALEKRNNFSKDIGLPGIADAHIVL TNLASQIGREEPNKVTLTGDARLDMNSLFGSQKATMKLKLKALPVFDKEKGAIYLQEMEVVDATVTPEKMQSVLQTLLPY LNQSLRSYFNQRPAYVLREDSSKGEALAKKLAKGIEVKPGEIVIPFTN
Sequences:
>Translated_208_residues MSAGATCCFVSRLGHRQHAKERHEKVFFAAALVVSGLLVGCNQLTQYTISEQEINQALEKRNNFSKDIGLPGIADAHIVL TNLASQIGREEPNKVTLTGDARLDMNSLFGSQKATMKLKLKALPVFDKEKGAIYLQEMEVVDATVTPEKMQSVLQTLLPY LNQSLRSYFNQRPAYVLREDSSKGEALAKKLAKGIEVKPGEIVIPFTN >Mature_207_residues SAGATCCFVSRLGHRQHAKERHEKVFFAAALVVSGLLVGCNQLTQYTISEQEINQALEKRNNFSKDIGLPGIADAHIVLT NLASQIGREEPNKVTLTGDARLDMNSLFGSQKATMKLKLKALPVFDKEKGAIYLQEMEVVDATVTPEKMQSVLQTLLPYL NQSLRSYFNQRPAYVLREDSSKGEALAKKLAKGIEVKPGEIVIPFTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787302, Length=184, Percent_Identity=88.0434782608696, Blast_Score=341, Evalue=2e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010835 [H]
Pfam domain/function: PF07273 DUF1439 [H]
EC number: NA
Molecular weight: Translated: 22979; Mature: 22848
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGATCCFVSRLGHRQHAKERHEKVFFAAALVVSGLLVGCNQLTQYTISEQEINQALEK CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH RNNFSKDIGLPGIADAHIVLTNLASQIGREEPNKVTLTGDARLDMNSLFGSQKATMKLKL HCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCEEEEEE KALPVFDKEKGAIYLQEMEVVDATVTPEKMQSVLQTLLPYLNQSLRSYFNQRPAYVLRED EECCCEECCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC SSKGEALAKKLAKGIEVKPGEIVIPFTN CCCHHHHHHHHHHCCCCCCCCEEEECCC >Mature Secondary Structure SAGATCCFVSRLGHRQHAKERHEKVFFAAALVVSGLLVGCNQLTQYTISEQEINQALEK CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH RNNFSKDIGLPGIADAHIVLTNLASQIGREEPNKVTLTGDARLDMNSLFGSQKATMKLKL HCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCEEEEEE KALPVFDKEKGAIYLQEMEVVDATVTPEKMQSVLQTLLPYLNQSLRSYFNQRPAYVLRED EECCCEECCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC SSKGEALAKKLAKGIEVKPGEIVIPFTN CCCHHHHHHHHHHCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11677609; 2872051 [H]