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The map label for this gene is flgA [H]

Identifier: 29142180

GI number: 29142180

Start: 1812818

End: 1813477

Strand: Direct

Name: flgA [H]

Synonym: t1747

Alternate gene names: 29142180

Gene position: 1812818-1813477 (Clockwise)

Preceding gene: 29142167

Following gene: 29142181

Centisome position: 37.83

GC content: 58.03

Gene sequence:

>660_bases
ATGCAAACGTTAAAACGAGGATTCGCCGTGGCGGCTTTGCTGTTCAGCCCCCTGACAATGGCGCAGGACATCAACGCCCA
GCTGACCACGTGGTTTTCCCAGCGTCTGGCTGGCTTCAGCGACGAGGTGGTTGTCACGCTCCGTTCACCGCCCAATCTGC
TACCGAGCTGCGAGCAGCCAGCCTTCAGCATGACGGGCAGCGCGAAGCTGTGGGGCAACGTCAATGTGGTGGCGCGCTGC
GCCAATGAAAAACGTTATTTGCAGGTGAATGTGCAAGCGACCGGCAATTATGTCGCCGTAGCCGCGCCCGTCGCGCGCGG
CGGAAAATTGACGCCGGCCAACGTCACGCTAAAACGTGGCAGACTGGATCAGTTACCGCCGCGGACGGTACTGGATATCC
GTCAGATTCAGGATGCCGTCAGTTTGCGCGATCTCGCTCCCGGGCAGCCGGTACAGCTTACGATGATACGTCAGGCCTGG
CGTGTCAAAGCGGGTCAACGAGTACAGGTCATCGCCAATGGCGAGGGGTTTAGCGTCAATGCGGAAGGTCAGGCGATGAA
TAATGCCGCCGTCGCGCAAAATGCGCGCGTGCGCATGACATCGGGTCAAATCGTGAGTGGAACCGTCGATTCTGATGGGA
ATATTCTTATTAACCTATAA

Upstream 100 bases:

>100_bases
TTATCGCCGGAATAAACGCAAAATGCGTCGCTATTTATTGCGTTGATGCTTGCTTCACACGGGTAGAATCCTGTCATGAC
ATCAACCAGGGGGAAGTACC

Downstream 100 bases:

>100_bases
TTGTGTAAAGATTTTGTCGCGGCTGCCGATGAGATATTCAACCATGATGGTAGCTGGCCGCTACAACGTAACCCTCGATG
AGGATAAATAAATGAGCATT

Product: flagellar basal body P-ring biosynthesis protein FlgA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MQTLKRGFAVAALLFSPLTMAQDINAQLTTWFSQRLAGFSDEVVVTLRSPPNLLPSCEQPAFSMTGSAKLWGNVNVVARC
ANEKRYLQVNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPGQPVQLTMIRQAW
RVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVRMTSGQIVSGTVDSDGNILINL

Sequences:

>Translated_219_residues
MQTLKRGFAVAALLFSPLTMAQDINAQLTTWFSQRLAGFSDEVVVTLRSPPNLLPSCEQPAFSMTGSAKLWGNVNVVARC
ANEKRYLQVNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPGQPVQLTMIRQAW
RVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVRMTSGQIVSGTVDSDGNILINL
>Mature_219_residues
MQTLKRGFAVAALLFSPLTMAQDINAQLTTWFSQRLAGFSDEVVVTLRSPPNLLPSCEQPAFSMTGSAKLWGNVNVVARC
ANEKRYLQVNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPGQPVQLTMIRQAW
RVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVRMTSGQIVSGTVDSDGNILINL

Specific function: Involved in the assembly process of the P-ring formation. It may associate with flgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly [H]

COG id: COG1261

COG function: function code NO; Flagellar basal body P-ring biosynthesis protein

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgA family [H]

Homologues:

Organism=Escherichia coli, GI1787312, Length=219, Percent_Identity=70.7762557077626, Blast_Score=309, Evalue=1e-85,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017585
- InterPro:   IPR013974 [H]

Pfam domain/function: PF08666 SAF [H]

EC number: NA

Molecular weight: Translated: 23552; Mature: 23552

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLKRGFAVAALLFSPLTMAQDINAQLTTWFSQRLAGFSDEVVVTLRSPPNLLPSCEQP
CCCHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
AFSMTGSAKLWGNVNVVARCANEKRYLQVNVQATGNYVAVAAPVARGGKLTPANVTLKRG
CEECCCCEEEECCCEEEEEECCCCEEEEEEEEECCCEEEEEECCCCCCEECCCCEEEECC
RLDQLPPRTVLDIRQIQDAVSLRDLAPGQPVQLTMIRQAWRVKAGQRVQVIANGEGFSVN
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHEEHHHHHCCCCCEEEEEECCCCEEEE
AEGQAMNNAAVAQNARVRMTSGQIVSGTVDSDGNILINL
CCCCCCCCHHHHCCCEEEEECCEEEEEEECCCCCEEEEC
>Mature Secondary Structure
MQTLKRGFAVAALLFSPLTMAQDINAQLTTWFSQRLAGFSDEVVVTLRSPPNLLPSCEQP
CCCHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
AFSMTGSAKLWGNVNVVARCANEKRYLQVNVQATGNYVAVAAPVARGGKLTPANVTLKRG
CEECCCCEEEECCCEEEEEECCCCEEEEEEEEECCCEEEEEECCCCCCEECCCCEEEECC
RLDQLPPRTVLDIRQIQDAVSLRDLAPGQPVQLTMIRQAWRVKAGQRVQVIANGEGFSVN
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHEEHHHHHCCCCCEEEEEECCCCEEEE
AEGQAMNNAAVAQNARVRMTSGQIVSGTVDSDGNILINL
CCCCCCCCHHHHCCCEEEEECCEEEEEEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8200538; 11677609 [H]