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The map label for this gene is trpD [H]

Identifier: 29142072

GI number: 29142072

Start: 1695587

End: 1697182

Strand: Direct

Name: trpD [H]

Synonym: t1636

Alternate gene names: 29142072

Gene position: 1695587-1697182 (Clockwise)

Preceding gene: 29142071

Following gene: 29142073

Centisome position: 35.38

GC content: 56.95

Gene sequence:

>1596_bases
ATGGCTGATATTCTGCTGCTCGATAACATCGACTCGTTTACCTGGAACCTGGCAGATCAGCTACGGACCAACGGTCATAA
CGTGGTGATTTACCGTAACCATATTCCGGCGCAGACGCTTATCGATCGCCTGGCGACAATGAAAAATCCGGTGCTAATGC
TCTCCCCCGGTCCGGGCATTCCCAGCGAGGCAGGCTGTATGCCGGAGCTGCTGACCCGACTACGCGGCAAGTTACCGATC
ATCGGCATTTGTCTGGGGCATCAGGCGATTGTCGAAGCTTACGGCGGTTATGTCGGTCAGGCGGGAGAAATCCTGCATGG
CAAAGCCTCCAGCATTGAACATGACGGTCAGGCGATGTTCGCCGGTCTGGCGAATCCGCTACCGGTCGCGCGTTATCATT
CGCTGGTCGGCAGTAATGTTCCTGCCGGGCTAACCATTAACGCCCATTTCAACGGCATGGTGATGGCGGTACGTCATGAT
GCGGATCGCGTTTGCGGTTTTCAATTTCATCCTGAGTCCATCCTGACGACACAGGGCGCGCGTCTACTGGAGCAAACATT
AGCCTGGGCGCAGCAAAAGCTGGAACCGACCAACACCCTACAGCCAATTCTGGAGAAACTCTATCAGGCGCAAACTCTGA
CGCAACAAGAGAGCCATCAGTTGTTTTCGGCGGTCGTCCGCGGCGAACTTAAGCCTGAACAGCTCGCCGCCGCGCTGGTG
AGCATGAAAATTCGCGGCGAGCATCCCAATGAAATTGCCGGCGCCGCCACTGCGTTGCTGGAAAATGCCGCCCCGTTCCC
GCGCCCGGACTATCTGTTTGCGGATATCGTTGGTACCGGCGGCGATGGCAGTAACAGTATCAATATCTCTACCGCCAGCG
CCTTTGTCGCGGCGGCCTGTGGACTGAAAGTGGCGAAACACGGCAACCGCAGCGTATCCAGCAAATCGGGGTCATCCGAT
CTGTTGGCGGCGTTCGGTATTAATCTGGATATGAACGCCGATAAATCACGTCAGGCGTTAGATGAACTGGGCGTCTGTTT
CCTGTTCGCGCCGAAATATCACACCGGATTCCGTCACGCGATGCCGGTTCGCCAACAGTTAAAAACGCGAACCCTGTTCA
ACGTACTCGGCCCGCTGATCAACCCAGCGCATCCGCCGCTGGCATTGATTGGCGTCTATAGCCCGGAACTGGTGCTGCCG
ATTGCGGAAACCTTACGGGTACTGGGCTATCAGCGCGCGGCGGTGGTACATAGCGGCGGCATGGATGAGGTTTCGCTCCA
TGCGCCGACGATTGTCGCGGAGCTGCATGACGGCGAAATTAAAAGCTATCAACTTACGGCGGAGGATTTTGGCCTGACGC
CTTACCATCAGGATCAGTTGGCTGGCGGCACGCCGGAAGAAAACCGTGACATTCTGACGCGGTTATTACAAGGTAAAGGC
GATGCCGCGCATGAGGCCGCCGTCGCCGCCAACGTGGCGATGCTGATGCGTCTGCATGGTCAGGAAGATCTCAAGGCCAA
CGCGCAAACCGTGCTTGATGTTCTGCGCAACGGCACCGCATATGACAGAGTCACCGCACTGGCGGCAAGAGGGTAA

Upstream 100 bases:

>100_bases
TGGACTCTGTTCCGCAGTCTGAAGCCGATGAAACCCGTAATAAAGCGCGCGCCGTATTGCGTGCTATCGCCACCGCGCAT
CATGCACAGGAGACCTTCTG

Downstream 100 bases:

>100_bases
ATAATGCAAACCGTTTTAGCGAAAATCGTCGCAGACAAGGCGATTTGGGTAGAAGCCCGCAAACAGCAACAGCCGCTGGC
CAGTTTTCAAAATGAGATCC

Product: bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase

Products: NA

Alternate protein names: Glutamine amidotransferase; Anthranilate phosphoribosyltransferase [H]

Number of amino acids: Translated: 531; Mature: 530

Protein sequence:

>531_residues
MADILLLDNIDSFTWNLADQLRTNGHNVVIYRNHIPAQTLIDRLATMKNPVLMLSPGPGIPSEAGCMPELLTRLRGKLPI
IGICLGHQAIVEAYGGYVGQAGEILHGKASSIEHDGQAMFAGLANPLPVARYHSLVGSNVPAGLTINAHFNGMVMAVRHD
ADRVCGFQFHPESILTTQGARLLEQTLAWAQQKLEPTNTLQPILEKLYQAQTLTQQESHQLFSAVVRGELKPEQLAAALV
SMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADIVGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSD
LLAAFGINLDMNADKSRQALDELGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGVYSPELVLP
IAETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGEIKSYQLTAEDFGLTPYHQDQLAGGTPEENRDILTRLLQGKG
DAAHEAAVAANVAMLMRLHGQEDLKANAQTVLDVLRNGTAYDRVTALAARG

Sequences:

>Translated_531_residues
MADILLLDNIDSFTWNLADQLRTNGHNVVIYRNHIPAQTLIDRLATMKNPVLMLSPGPGIPSEAGCMPELLTRLRGKLPI
IGICLGHQAIVEAYGGYVGQAGEILHGKASSIEHDGQAMFAGLANPLPVARYHSLVGSNVPAGLTINAHFNGMVMAVRHD
ADRVCGFQFHPESILTTQGARLLEQTLAWAQQKLEPTNTLQPILEKLYQAQTLTQQESHQLFSAVVRGELKPEQLAAALV
SMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADIVGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSD
LLAAFGINLDMNADKSRQALDELGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGVYSPELVLP
IAETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGEIKSYQLTAEDFGLTPYHQDQLAGGTPEENRDILTRLLQGKG
DAAHEAAVAANVAMLMRLHGQEDLKANAQTVLDVLRNGTAYDRVTALAARG
>Mature_530_residues
ADILLLDNIDSFTWNLADQLRTNGHNVVIYRNHIPAQTLIDRLATMKNPVLMLSPGPGIPSEAGCMPELLTRLRGKLPII
GICLGHQAIVEAYGGYVGQAGEILHGKASSIEHDGQAMFAGLANPLPVARYHSLVGSNVPAGLTINAHFNGMVMAVRHDA
DRVCGFQFHPESILTTQGARLLEQTLAWAQQKLEPTNTLQPILEKLYQAQTLTQQESHQLFSAVVRGELKPEQLAAALVS
MKIRGEHPNEIAGAATALLENAAPFPRPDYLFADIVGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDL
LAAFGINLDMNADKSRQALDELGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGVYSPELVLPI
AETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGEIKSYQLTAEDFGLTPYHQDQLAGGTPEENRDILTRLLQGKGD
AAHEAAVAANVAMLMRLHGQEDLKANAQTVLDVLRNGTAYDRVTALAARG

Specific function: Tryptophan biosynthesis; first step. Tryptophan biosynthesis; second step. [C]

COG id: COG0547

COG function: function code E; Anthranilate phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787517, Length=531, Percent_Identity=97.1751412429379, Blast_Score=1019, Evalue=0.0,
Organism=Escherichia coli, GI1789760, Length=187, Percent_Identity=45.9893048128342, Blast_Score=158, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6322638, Length=227, Percent_Identity=37.4449339207048, Blast_Score=164, Evalue=4e-41,
Organism=Saccharomyces cerevisiae, GI6320561, Length=277, Percent_Identity=34.2960288808664, Blast_Score=127, Evalue=4e-30,

Paralogues:

None

Copy number: 945 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005940
- InterPro:   IPR006220
- InterPro:   IPR001317
- InterPro:   IPR011702
- InterPro:   IPR017926
- InterPro:   IPR000991
- InterPro:   IPR000312
- InterPro:   IPR017459
- InterPro:   IPR020072
- InterPro:   IPR006221 [H]

Pfam domain/function: PF00117 GATase; PF02885 Glycos_trans_3N; PF00591 Glycos_transf_3 [H]

EC number: =4.1.3.27; =2.4.2.18 [H]

Molecular weight: Translated: 56953; Mature: 56822

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS00442 GATASE_TYPE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADILLLDNIDSFTWNLADQLRTNGHNVVIYRNHIPAQTLIDRLATMKNPVLMLSPGPGI
CCCEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCC
PSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAGEILHGKASSIEHDGQAMF
CCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCCCEECCCCCCCCCCCHHHH
AGLANPLPVARYHSLVGSNVPAGLTINAHFNGMVMAVRHDADRVCGFQFHPESILTTQGA
HHCCCCCCHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCHHCCCEECCHHHHHHHHH
RLLEQTLAWAQQKLEPTNTLQPILEKLYQAQTLTQQESHQLFSAVVRGELKPEQLAAALV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADIVGTGGDGSNSINISTASAFVAAAC
HHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEEEEEHHHHHHHHHH
GLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNADKSRQALDELGVCFLFAPKYHTGFRHA
HHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCHHH
MPVRQQLKTRTLFNVLGPLINPAHPPLALIGVYSPELVLPIAETLRVLGYQRAAVVHSGG
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHEEEECCC
MDEVSLHAPTIVAELHDGEIKSYQLTAEDFGLTPYHQDQLAGGTPEENRDILTRLLQGKG
CCCEEECCCEEEEEECCCCCCEEEEEHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCC
DAAHEAAVAANVAMLMRLHGQEDLKANAQTVLDVLRNGTAYDRVTALAARG
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure 
ADILLLDNIDSFTWNLADQLRTNGHNVVIYRNHIPAQTLIDRLATMKNPVLMLSPGPGI
CCEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCC
PSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAGEILHGKASSIEHDGQAMF
CCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCCCEECCCCCCCCCCCHHHH
AGLANPLPVARYHSLVGSNVPAGLTINAHFNGMVMAVRHDADRVCGFQFHPESILTTQGA
HHCCCCCCHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCHHCCCEECCHHHHHHHHH
RLLEQTLAWAQQKLEPTNTLQPILEKLYQAQTLTQQESHQLFSAVVRGELKPEQLAAALV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADIVGTGGDGSNSINISTASAFVAAAC
HHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEEEEEHHHHHHHHHH
GLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNADKSRQALDELGVCFLFAPKYHTGFRHA
HHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCHHH
MPVRQQLKTRTLFNVLGPLINPAHPPLALIGVYSPELVLPIAETLRVLGYQRAAVVHSGG
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHEEEECCC
MDEVSLHAPTIVAELHDGEIKSYQLTAEDFGLTPYHQDQLAGGTPEENRDILTRLLQGKG
CCCEEECCCEEEEEECCCCCCEEEEEHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCC
DAAHEAAVAANVAMLMRLHGQEDLKANAQTVLDVLRNGTAYDRVTALAARG
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7038627; 6283099; 9097039; 9278503; 4594441 [H]