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The map label for this gene is ynaI [H]

Identifier: 29142007

GI number: 29142007

Start: 1627441

End: 1628472

Strand: Direct

Name: ynaI [H]

Synonym: t1567

Alternate gene names: 29142007

Gene position: 1627441-1628472 (Clockwise)

Preceding gene: 29142005

Following gene: 29142009

Centisome position: 33.96

GC content: 44.57

Gene sequence:

>1032_bases
ATGTTCACTGAATTTTTTCTCAAAAACGCATTTAATCTGGCGATACTTTTCAGTTGCGGTATGGCGTTGCTGGTCGTGAG
ATTTTGGCTCAGCCGTAACGTACAGTGGAAGAAAGGATTCACGTTCCATGCGGCACAGTTTTTTATTTACGCGATTATTA
TTGGAACCATCGGGAGCATCCTGAATAATGCTATTGAAGATTATAATTTGCGTTTTATCTCTTCCGGGGTCATTGATTTT
ATCTGCACCTCGCTCATTGCGCTTATTCTGACGATAAAACTTTTCCTGATTATTAACCAATTTGAAAAAGCACAGGTCAA
TAAAGGTAGAGATGTCACCAGTACCCGTATTCTGGCACGGGTCATAAAAATAACCATTATTGTCGCGATTGTCTTACTGT
ATGGCGAACATTTTGGCATGAGTCTGTCCGGTCTGCTGACCTTTGGCGGTATCGGCGGTATCGCTGTTGGTATGGCGGGC
AAAGATGTCCTGAGCAATTTTTTCTCCGGTATTATGCTCTATTTCGATCGCCCCTTCAGTATCGGAGACTGGATTCGTTC
TCCTGACAGAAATATCGAAGGTACGGTCGCCGAAATCGGCTGGCGAATTACACGAATTAACACATTCGACCACCGCCCGT
TGTACGTGCCTAATTCCGTCTTTTCATCCATTAGCGTTGAGAATCCGGGACGGATGACCAACCGTCGAATAAAAACGGTT
ATTGGATTACGTTACGAAGATGCCGACAAAATTGGCCTCATTGTTGACGCTATCAGAAACATGCTGCAGGCGCACAGCGA
TATCGATCAGAAACAGACGCTGTTGGTCTATTTTAATGAATTCGCCGACTCTTCGCTGAATATTATGGTGTATTGCTTTA
CCAAAACAACAATATGGCAGGAATGGCTTGCTGTACAGCAGGATGTTTACCTGAAAATTATTGCGATTGTCCAGGAAAAC
GGCGCTGACTTCGCCTTCCCAAGCCAGACGCTATATATCGATGACCCGGAGGCCGCGCCTGCGATAAAATAA

Upstream 100 bases:

>100_bases
TTCTTTTTACTTATCGATGATCTACGCGTTTATCCTGGGTAAAATACCTGTTAATCAGGTCATTCTGAGCTGTTATCGTA
GGAAGGAGCGGAAAACAATA

Downstream 100 bases:

>100_bases
AAGATAGCCGGTGCCCGATAACGCTTATCGGGCACCGAGGCTTCCCTGTCCGGATGACGGGTTGTTAGCGCCTTCCTTAC
GGTGATCAACGGCTCTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MFTEFFLKNAFNLAILFSCGMALLVVRFWLSRNVQWKKGFTFHAAQFFIYAIIIGTIGSILNNAIEDYNLRFISSGVIDF
ICTSLIALILTIKLFLIINQFEKAQVNKGRDVTSTRILARVIKITIIVAIVLLYGEHFGMSLSGLLTFGGIGGIAVGMAG
KDVLSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITRINTFDHRPLYVPNSVFSSISVENPGRMTNRRIKTV
IGLRYEDADKIGLIVDAIRNMLQAHSDIDQKQTLLVYFNEFADSSLNIMVYCFTKTTIWQEWLAVQQDVYLKIIAIVQEN
GADFAFPSQTLYIDDPEAAPAIK

Sequences:

>Translated_343_residues
MFTEFFLKNAFNLAILFSCGMALLVVRFWLSRNVQWKKGFTFHAAQFFIYAIIIGTIGSILNNAIEDYNLRFISSGVIDF
ICTSLIALILTIKLFLIINQFEKAQVNKGRDVTSTRILARVIKITIIVAIVLLYGEHFGMSLSGLLTFGGIGGIAVGMAG
KDVLSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITRINTFDHRPLYVPNSVFSSISVENPGRMTNRRIKTV
IGLRYEDADKIGLIVDAIRNMLQAHSDIDQKQTLLVYFNEFADSSLNIMVYCFTKTTIWQEWLAVQQDVYLKIIAIVQEN
GADFAFPSQTLYIDDPEAAPAIK
>Mature_343_residues
MFTEFFLKNAFNLAILFSCGMALLVVRFWLSRNVQWKKGFTFHAAQFFIYAIIIGTIGSILNNAIEDYNLRFISSGVIDF
ICTSLIALILTIKLFLIINQFEKAQVNKGRDVTSTRILARVIKITIIVAIVLLYGEHFGMSLSGLLTFGGIGGIAVGMAG
KDVLSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITRINTFDHRPLYVPNSVFSSISVENPGRMTNRRIKTV
IGLRYEDADKIGLIVDAIRNMLQAHSDIDQKQTLLVYFNEFADSSLNIMVYCFTKTTIWQEWLAVQQDVYLKIIAIVQEN
GADFAFPSQTLYIDDPEAAPAIK

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=340, Percent_Identity=76.1764705882353, Blast_Score=544, Evalue=1e-156,
Organism=Escherichia coli, GI1789291, Length=260, Percent_Identity=24.2307692307692, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 38708; Mature: 38708

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS01246 UPF0003

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTEFFLKNAFNLAILFSCGMALLVVRFWLSRNVQWKKGFTFHAAQFFIYAIIIGTIGSI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LNNAIEDYNLRFISSGVIDFICTSLIALILTIKLFLIINQFEKAQVNKGRDVTSTRILAR
HHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VIKITIIVAIVLLYGEHFGMSLSGLLTFGGIGGIAVGMAGKDVLSNFFSGIMLYFDRPFS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHEECCCCHHHHHHHHHHHHHHCCCCCC
IGDWIRSPDRNIEGTVAEIGWRITRINTFDHRPLYVPNSVFSSISVENPGRMTNRRIKTV
HHHHHCCCCCCCCCHHHHHCEEEEEEECCCCCCEECCHHHHHHCCCCCCCCHHHHHHHHH
IGLRYEDADKIGLIVDAIRNMLQAHSDIDQKQTLLVYFNEFADSSLNIMVYCFTKTTIWQ
HCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCCCCEEEEEEEEHHHHHH
EWLAVQQDVYLKIIAIVQENGADFAFPSQTLYIDDPEAAPAIK
HHHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MFTEFFLKNAFNLAILFSCGMALLVVRFWLSRNVQWKKGFTFHAAQFFIYAIIIGTIGSI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LNNAIEDYNLRFISSGVIDFICTSLIALILTIKLFLIINQFEKAQVNKGRDVTSTRILAR
HHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VIKITIIVAIVLLYGEHFGMSLSGLLTFGGIGGIAVGMAGKDVLSNFFSGIMLYFDRPFS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHEECCCCHHHHHHHHHHHHHHCCCCCC
IGDWIRSPDRNIEGTVAEIGWRITRINTFDHRPLYVPNSVFSSISVENPGRMTNRRIKTV
HHHHHCCCCCCCCCHHHHHCEEEEEEECCCCCCEECCHHHHHHCCCCCCCCHHHHHHHHH
IGLRYEDADKIGLIVDAIRNMLQAHSDIDQKQTLLVYFNEFADSSLNIMVYCFTKTTIWQ
HCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCCCCEEEEEEEEHHHHHH
EWLAVQQDVYLKIIAIVQENGADFAFPSQTLYIDDPEAAPAIK
HHHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]