Click here to switch to the map view.

The map label for this gene is 29141739

Identifier: 29141739

GI number: 29141739

Start: 1345450

End: 1345998

Strand: Direct

Name: 29141739

Synonym: t1278

Alternate gene names: NA

Gene position: 1345450-1345998 (Clockwise)

Preceding gene: 29141738

Following gene: 29141740

Centisome position: 28.08

GC content: 46.08

Gene sequence:

>549_bases
GTGTTGCAACTTTATCGTTATTTCTGGCAACCTGCTCGTTACGCTGTACCGGAATGGCTGGATAAGCTGGGCTTTCATCT
TTCAAACTGCTGGCGTTATGGCGATCGGCCCAAATTGGATCGTCTTCTTGACAGAGCGTTAAATAGACTAAGGGGAAGCT
CTGTTATTCCAGCCTGTTTAAATGACAGGCAAAAACGACAGATTCGTCTTGCGCCGCGTATATCGGCATTTGCCTTTGGA
CTGGGATTATTCAAACTCAGGTGTAGTGACTATTTTATGCTACCAGAGTATCGGCAATTGCTTCTACAGTGGTTTAGCGA
GGATGAGATCTGGCAGCTATATGGTTGGTTGGGGCAAAGAGATGGCAAATTACTTCCTCCGCAAGTGATGCAACAAACTG
CATTGCAGATCGGTACCGCCATTCTTAATCGGGAAGCGCATGACGATGCGGTTTTACATGCGCTATTAGTATTATTACCC
CCTCCGCAGCGTATACTTTGGCCGAAGACTTCTCTTACCGAGATTATCTTCATGGAGCATTTGCTATGA

Upstream 100 bases:

>100_bases
ATCAGTTGATGTTATCGTTGACAGGACTGTTATTAGGAGTGGGCATCCTGATCGGCTATTTTTGCCTGAGACGCCGTTTT
TGAGCCGACCTGATCCCGAA

Downstream 100 bases:

>100_bases
GTTTTACTTCACTTCCTCTGACGGAAATTAACCATAAGCTACCCGCTCGAAATATTATTGAGTCACAGTGGATAACATTA
CAATTAACTTTATTTGCACA

Product: pathogenicity island protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MLQLYRYFWQPARYAVPEWLDKLGFHLSNCWRYGDRPKLDRLLDRALNRLRGSSVIPACLNDRQKRQIRLAPRISAFAFG
LGLFKLRCSDYFMLPEYRQLLLQWFSEDEIWQLYGWLGQRDGKLLPPQVMQQTALQIGTAILNREAHDDAVLHALLVLLP
PPQRILWPKTSLTEIIFMEHLL

Sequences:

>Translated_182_residues
MLQLYRYFWQPARYAVPEWLDKLGFHLSNCWRYGDRPKLDRLLDRALNRLRGSSVIPACLNDRQKRQIRLAPRISAFAFG
LGLFKLRCSDYFMLPEYRQLLLQWFSEDEIWQLYGWLGQRDGKLLPPQVMQQTALQIGTAILNREAHDDAVLHALLVLLP
PPQRILWPKTSLTEIIFMEHLL
>Mature_182_residues
MLQLYRYFWQPARYAVPEWLDKLGFHLSNCWRYGDRPKLDRLLDRALNRLRGSSVIPACLNDRQKRQIRLAPRISAFAFG
LGLFKLRCSDYFMLPEYRQLLLQWFSEDEIWQLYGWLGQRDGKLLPPQVMQQTALQIGTAILNREAHDDAVLHALLVLLP
PPQRILWPKTSLTEIIFMEHLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21533; Mature: 21533

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQLYRYFWQPARYAVPEWLDKLGFHLSNCWRYGDRPKLDRLLDRALNRLRGSSVIPACL
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHH
NDRQKRQIRLAPRISAFAFGLGLFKLRCSDYFMLPEYRQLLLQWFSEDEIWQLYGWLGQR
CCHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCHHHHHHHHHHCC
DGKLLPPQVMQQTALQIGTAILNREAHDDAVLHALLVLLPPPQRILWPKTSLTEIIFMEH
CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHH
LL
CC
>Mature Secondary Structure
MLQLYRYFWQPARYAVPEWLDKLGFHLSNCWRYGDRPKLDRLLDRALNRLRGSSVIPACL
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHH
NDRQKRQIRLAPRISAFAFGLGLFKLRCSDYFMLPEYRQLLLQWFSEDEIWQLYGWLGQR
CCHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCHHHHHHHHHHCC
DGKLLPPQVMQQTALQIGTAILNREAHDDAVLHALLVLLPPPQRILWPKTSLTEIIFMEH
CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHH
LL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA