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The map label for this gene is ybgA [H]

Identifier: 29141718

GI number: 29141718

Start: 1328596

End: 1329555

Strand: Reverse

Name: ybgA [H]

Synonym: t1257

Alternate gene names: 29141718

Gene position: 1329555-1328596 (Counterclockwise)

Preceding gene: 29141719

Following gene: 29141714

Centisome position: 27.75

GC content: 55.94

Gene sequence:

>960_bases
ATGAATAACAAACCCGTAGTCGGCATTAGCGGATGTCTGACTGGCGCCGCGGTACGCTTTGATGGCGGACATAAGCGTAT
GGATTTTGTCATGAACTCTCTGGCGCCGTGGGTGGCCTACAAACCGATCTGCCCGGAGGTGGCGATCGGCCTGCCCGTGC
CCCGCCCTGCGCTGCGTCTTATCCAGACGACCTGTGGCGACATTCGGATGCGCTATAGCCATGCCCCGCACGATGACGTC
ACCGAGCGAATGAATGCCTTTGCCGATCGGTTTCTGCCAACAATAGGCGAACTGGCGGGGTTTATTGTGTGTGCGAAATC
GCCCAGTTGCGGAATGGAGCGCGTTCGCCTGTATGATGAAAAGGGTAACAGGGGCCGCAAAGCTGGCACGGGGCTGTTTA
CCGCCGCGATGATGGACAAATATCCCTGGCTGCCGATAGAGGAAGATGGTCGCCTGCACGATCCGGTACTACGCGAGAAT
TTCATCGCACGTATCTTCGCGCTACATGAATTAAATGCGCTACGCGCGCAGGGCTTGAGTCGTCACAGTTTGCTCGCGTT
TCATAGCCGATACAAACTTCAGCTTCTCGCCCACCACCAGGCCGGCTACCGCGAAATTGGCCCTTTCGTCGCGCGTCTGC
ATGAGTGGGACGATCTGGATGCCTTCTTTGTCCGATACAGAGAAAAACTGATGGCTATCCTGCGACACCCCGCTTCACGT
AAAAATCACACCAATGTGCTGATGCATATCCAGGGCTATTTTCACCGCGCGTTGAACAGCAGGCAACGCGCGGAATTACG
CGAGGTGATTCTCGGCTACCGGGCGGGCCGACTACCTATCCTGGCACCGTTAACGCTGCTGAAGCACTATCTGGCGGAAC
ATCCGGATGACTATCTACGCAGCCAGAATTATTTTGAGCCGTACCCTGATACATTAGGGCTGCGCTTAGCCATCACCTGA

Upstream 100 bases:

>100_bases
AACTTAGACAAAAAAACAAAGTTGTGTAAGTTTTAAATCAGCGTGAGATAACATTTTGCGCCGTTGGCGTCAGTCGTCGT
ACTTTCAATAAGGGGGAATC

Downstream 100 bases:

>100_bases
TAACCCTGCGCATCGCTAACGGCGGGTAACCAGCCCGCCATGGTGACAATCGCGACAATTCAAAGGCGATTTCGTTATTG
CCACCCTGATAGCGGCTATG

Product: pathogenicity island protein

Products: NA

Alternate protein names: ORF169; TKP [H]

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MNNKPVVGISGCLTGAAVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCGDIRMRYSHAPHDDV
TERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLREN
FIARIFALHELNALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT

Sequences:

>Translated_319_residues
MNNKPVVGISGCLTGAAVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCGDIRMRYSHAPHDDV
TERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLREN
FIARIFALHELNALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT
>Mature_319_residues
MNNKPVVGISGCLTGAAVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCGDIRMRYSHAPHDDV
TERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLREN
FIARIFALHELNALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT

Specific function: Unknown

COG id: COG1683

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786925, Length=157, Percent_Identity=49.6815286624204, Blast_Score=167, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013560 [H]

Pfam domain/function: PF08349 DUF1722 [H]

EC number: NA

Molecular weight: Translated: 36430; Mature: 36430

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKPVVGISGCLTGAAVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
CCCCCEEEEHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHH
IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
HHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHC
KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
HHHHHHHHHHHHEEEEHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
CCCCEEEEEHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHH
SQNYFEPYPDTLGLRLAIT
CCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MNNKPVVGISGCLTGAAVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
CCCCCEEEEHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHH
IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
HHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHC
KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
HHHHHHHHHHHHEEEEHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
CCCCEEEEEHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHH
SQNYFEPYPDTLGLRLAIT
CCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6325460; 8905232; 9278503; 8387990 [H]