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The map label for this gene is sufB [H]

Identifier: 29141702

GI number: 29141702

Start: 1307374

End: 1308861

Strand: Direct

Name: sufB [H]

Synonym: t1238

Alternate gene names: 29141702

Gene position: 1307374-1308861 (Clockwise)

Preceding gene: 29141701

Following gene: 29141703

Centisome position: 27.28

GC content: 52.22

Gene sequence:

>1488_bases
ATGTCTCGTAATACTGAAGCAACGGAAGAGGTCGGCATCTGGACAGGCGGACGCCTTAATTACAAAGAAGGATTTTTCAC
GCAATTACCCACTGATGAACTGGCAAAAGGCATCAGCGAAGAGGTGGTGCGTGCGATTTCCGCAAAGCGTAACGAACCTG
ATTGGATGCTGGAATTTCGCCTCAATGCCTATAGAGCCTGGCTGGACATGGATGAACCGCACTGGCTGAAAGCGCATTAC
GATAAACTGAACTATCAGGACTACAGCTATTACTCTGCGCCATCATGCGGAAACTGCGACGATAGCTGCGTTTCCCAGCC
GGGAGCCGTACAGCAAACGGGCGCGAATACCTTTTTGAGTAAAGAGGTTGAAGACGCTTTCGAGCAACTTGGCGTTCCGG
TTCGCGAAGGGAAAGAGGTCGCCGTTGATGCGATTTTTGACTCGGTCTCCGTAGCGACCACATACCGTGAAAAACTGGCG
GAACAGGGCATTATTTTCTGTTCTTTTGGCGAAGCGATACACGATCACCCTGACCTGGTCAGGAAATATCTTGGCACCGT
CGTGCCGGGGAACGATAACTTTTTTGCCGCGCTGAATGCGGCAGTCGCTTCCGATGGGACATTTATCTATGTTCCCAAAG
GCGTGCGTTGCCCAATGGAGTTATCCACCTATTTTCGCATTAACGCTGAGAAAACCGGTCAGTTTGAGCGCACGATTCTG
GTGGCGGATGAAGGCAGCTATGTGAGTTATATCGAAGGCTGCTCCGCGCCCGTACGCGACAGTTATCAGCTCCACGCCGC
GGTAGTGGAAGTCATCATCCATAAAGATGCTGAAGTAAAATATTCCACCGTACAAAACTGGTTCCCGGGCGACAACAACA
CGGGCGGCATTCTGAACTTTGTGACCAAGCGGGCGTTGTGCGAAGGGGAAAACAGCAAGATGTCGTGGACCCAGTCGGAA
ACCGGTTCGGCGATTACCTGGAAATACCCGAGCTGCATTCTGCGCGGTGATAATTCTATCGGCGAGTTCTATTCCGTTGC
GCTGACCAGTGGACATCAGCAGGCTGACACCGGCACCAAAATGATCCATATCGGTAAAAACACGCGCTCAACCATTATCT
CAAAAGGCATTTCCGCCGGCCACAGCCAGAACAGCTACCGTGGGCTGGTAAAAATTATGCCGACGGCAACCAACGCCCGA
AATTTCACCCAATGCGACTCCATGTTGATTGGCGCGGACTGCGGCGCGCATACGTTCCCGTATGTTGAATGCCGCAATAA
CAGCGCGCAGCTGGAGCTCGAGGCGACGACATCACGCATCGGTGAAGATCAGCTTTTCTATTGTCTGCAACGCGGCATCA
GCGAAGAAGACGCTATTTCGATGATCGTCAACGGTTTCTGCAAAGACGTTTTCTCGGAACTGCCGCTGGAGTTCGCCGTT
GAAGCGCAAAAACTGCTGGCGATTAGCCTTGAGCACAGCGTCGGTTAA

Upstream 100 bases:

>100_bases
ATTACGTACAGGAAGGGCTGAACCAGTTATTTAAATTTCATAACCCCAAAGCCCAGAATGAATGTGGCTGCGGCGAAAGT
TTTGGGGTATAGGCGGTACT

Downstream 100 bases:

>100_bases
TGATGAAGGAAAACCCATGTTAAGCATTAAAGATTTACAGGTCAGTGTGGAAGAAAAGGCGATTTTGCGTGGCCTGAATC
TGGATATTCGCCCCGGCGAA

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPDWMLEFRLNAYRAWLDMDEPHWLKAHY
DKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLA
EQGIIFCSFGEAIHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERTIL
VADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSE
TGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNAR
NFTQCDSMLIGADCGAHTFPYVECRNNSAQLELEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAV
EAQKLLAISLEHSVG

Sequences:

>Translated_495_residues
MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPDWMLEFRLNAYRAWLDMDEPHWLKAHY
DKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLA
EQGIIFCSFGEAIHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERTIL
VADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSE
TGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNAR
NFTQCDSMLIGADCGAHTFPYVECRNNSAQLELEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAV
EAQKLLAISLEHSVG
>Mature_494_residues
SRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPDWMLEFRLNAYRAWLDMDEPHWLKAHYD
KLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLSKEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAE
QGIIFCSFGEAIHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERTILV
ADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSET
GSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARN
FTQCDSMLIGADCGAHTFPYVECRNNSAQLELEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAVE
AQKLLAISLEHSVG

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=495, Percent_Identity=95.7575757575758, Blast_Score=998, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 54752; Mature: 54621

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPDWMLEFR
CCCCCCCHHHCCCEECCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS
EEHHEEEECCCCCCHHHHHHHCCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCCCCHHHH
KEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPDLV
HHHHHHHHHCCCCHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHCCCHHHH
RKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERTIL
HHHHCEECCCCCCEEEEEEHHHCCCCCEEEECCCCCCCCEECEEEEEECCCCCCEEEEEE
VADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGILNF
EECCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCCHHHHH
VTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTGTK
HHHHHHHCCCCCCEEEECCCCCCEEEEECCCEEEECCCCCCHHEEEEECCCCCCCCCCCE
MIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHTFP
EEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCEEEECCCCCCCCC
YVECRNNSAQLELEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAV
EEEECCCCCEEEEEEHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
EAQKLLAISLEHSVG
HHHHHEEEEECCCCC
>Mature Secondary Structure 
SRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPDWMLEFR
CCCCCCHHHCCCEECCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS
EEHHEEEECCCCCCHHHHHHHCCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCCCCHHHH
KEVEDAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPDLV
HHHHHHHHHCCCCHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHCCCHHHH
RKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERTIL
HHHHCEECCCCCCEEEEEEHHHCCCCCEEEECCCCCCCCEECEEEEEECCCCCCEEEEEE
VADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGILNF
EECCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCCHHHHH
VTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTGTK
HHHHHHHCCCCCCEEEECCCCCCEEEEECCCEEEECCCCCCHHEEEEECCCCCCCCCCCE
MIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHTFP
EEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCEEEECCCCCCCCC
YVECRNNSAQLELEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAV
EEEECCCCCEEEEEEHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
EAQKLLAISLEHSVG
HHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 10322040 [H]