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The map label for this gene is ydiE [H]

Identifier: 29141691

GI number: 29141691

Start: 1293494

End: 1293685

Strand: Reverse

Name: ydiE [H]

Synonym: t1227

Alternate gene names: 29141691

Gene position: 1293685-1293494 (Counterclockwise)

Preceding gene: 29141692

Following gene: 29141676

Centisome position: 27.0

GC content: 51.04

Gene sequence:

>192_bases
ATGTCGCGTATGGATAACACCGAGCTGCCTCACCCTAAGGAAATAGACAATGAAACGCTTCTCCCTGCCGCTGAACGGCG
CGTCAACAGTCAGGCGCTATTAGGTCCGGACGGCAAAGTCATTATCGATCACAACGGTCAGGAGTATCTGTTGCGCAAAA
CTCAGGCCGGTAAGCTACTGTTAACCAAATAG

Upstream 100 bases:

>100_bases
TCTACGCGCGCGTATATCACTCCACAGAATTAGCACTTGCTGTTATCGCATTAATTATTGATAATAATAATCATTGTGAG
TTTGATTATTAATAAATAAC

Downstream 100 bases:

>100_bases
CGCTCCCGCCAGCAGACGATTCTGCTGGCATCTGGCTAACTTGAACAACTGACCTCCAGCCGCTTTCCCCACTCCGGCGG
TCGGCTGGCATAGTCATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MSRMDNTELPHPKEIDNETLLPAAERRVNSQALLGPDGKVIIDHNGQEYLLRKTQAGKLLLTK

Sequences:

>Translated_63_residues
MSRMDNTELPHPKEIDNETLLPAAERRVNSQALLGPDGKVIIDHNGQEYLLRKTQAGKLLLTK
>Mature_62_residues
SRMDNTELPHPKEIDNETLLPAAERRVNSQALLGPDGKVIIDHNGQEYLLRKTQAGKLLLTK

Specific function: Unknown

COG id: COG4256

COG function: function code P; Hemin uptake protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Y.enterocolitica hemP [H]

Homologues:

Organism=Escherichia coli, GI1787998, Length=63, Percent_Identity=60.3174603174603, Blast_Score=76, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016060
- InterPro:   IPR019600 [H]

Pfam domain/function: PF10636 hemP [H]

EC number: NA

Molecular weight: Translated: 7079; Mature: 6948

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRMDNTELPHPKEIDNETLLPAAERRVNSQALLGPDGKVIIDHNGQEYLLRKTQAGKLL
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEECCCCCEEEECCCCEEEEEECCCCEEE
LTK
EEC
>Mature Secondary Structure 
SRMDNTELPHPKEIDNETLLPAAERRVNSQALLGPDGKVIIDHNGQEYLLRKTQAGKLL
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEECCCCCEEEECCCCEEEEEECCCCEEE
LTK
EEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]