Click here to switch to the map view.

The map label for this gene is 29141673

Identifier: 29141673

GI number: 29141673

Start: 1275560

End: 1276519

Strand: Reverse

Name: 29141673

Synonym: t1208

Alternate gene names: NA

Gene position: 1276519-1275560 (Counterclockwise)

Preceding gene: 29141676

Following gene: 29141671

Centisome position: 26.64

GC content: 47.5

Gene sequence:

>960_bases
GTGAACAAATACAGCTATTGCGCAACGATGATTGCCGCCATACTCAGTACGACCACAATGGCCAATGCCAGTAGCCTTGC
TATTTCAGTGGCGAATGATGATGCAGGTATATTTCAACCATCCTTAAATGCCCTTTACGGGCACAAGGCTGCAGACCGGG
GTGATTATACTGCCGGGCTCTTTTTAGGCTACAGCCACGATCTCACTGACGCCAGTCAACTCTCTTTTCATATCGCGCAA
GATATTTATTCTCCATCTGGCGCCAATAAAAGAAAGCCTGAAGCCGTCAAAGGCGACCGCGCGTTCAGCGCCTTTCTTCA
TACCGGACTGGAGTGGAATTCATTAGCCACCAATTGGTTACGTTATCGTTTAGGTACCGATATCGGCGTTATTGGTCCTG
ACGCAGGCGGTCAGGAGGTTCAGAATCGGGCGCATCGAATAATAGGCGCAGAAAAATACCCTGCCTGGCAGGATCAAATT
GAAAACCGTTATGGTTACACGGCAAAAGGAATGGTCTCCCTTACGCCAGCTATTGATATTCTGGGTGTCAATGTGGGCTT
CTATCCAGAAGTCTCTGCTGTCGGCGGCAATCTCTTCCAGTATTTGGGGTACGGCGCAACCGTTGCGCTGGGAAATGATA
AGACCTTCAACTCTGATAATGGGTTTGGGTTATTGTCCCGCCGAGGGTTAATACACACTCAAAAAGAGGGATTGATCTAT
AAAGTATTTGCTGGCGTTGAGCGCAGGGAAGTTGATAAAAACTACACGTTACAGGGGAAAACGCTGCAAACAAAAATGGA
AACGGTGGATATTAATAAAACCGTGGATGAATATCGCGTCGGTGCCACCATCGGCTATTCTCCCGTCGCATTTTCTCTTT
CTTTAAACAAAGTCACGTCGGAATTTCGCACCGGAGACGACTATTCTTATATCAACGGCGACATCACCTTCTTCTTCTGA

Upstream 100 bases:

>100_bases
TTAGTTATATTTAAAGGTTTAATAAGCACTGCGCATCATGCTGCTGTGCTTATTACTTTGTAAAAATAAGAGTATTCACT
TTCATATTCAGGGGTAAAAA

Downstream 100 bases:

>100_bases
GGCGTCACCACGGAATAACCGGGTTACGTAACGTAACCCGGCGCAATATTACATCTTATAGCCCAGCGTTACCGTAGTGC
GGCGATCGGTATGTTCAGGC

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MNKYSYCATMIAAILSTTTMANASSLAISVANDDAGIFQPSLNALYGHKAADRGDYTAGLFLGYSHDLTDASQLSFHIAQ
DIYSPSGANKRKPEAVKGDRAFSAFLHTGLEWNSLATNWLRYRLGTDIGVIGPDAGGQEVQNRAHRIIGAEKYPAWQDQI
ENRYGYTAKGMVSLTPAIDILGVNVGFYPEVSAVGGNLFQYLGYGATVALGNDKTFNSDNGFGLLSRRGLIHTQKEGLIY
KVFAGVERREVDKNYTLQGKTLQTKMETVDINKTVDEYRVGATIGYSPVAFSLSLNKVTSEFRTGDDYSYINGDITFFF

Sequences:

>Translated_319_residues
MNKYSYCATMIAAILSTTTMANASSLAISVANDDAGIFQPSLNALYGHKAADRGDYTAGLFLGYSHDLTDASQLSFHIAQ
DIYSPSGANKRKPEAVKGDRAFSAFLHTGLEWNSLATNWLRYRLGTDIGVIGPDAGGQEVQNRAHRIIGAEKYPAWQDQI
ENRYGYTAKGMVSLTPAIDILGVNVGFYPEVSAVGGNLFQYLGYGATVALGNDKTFNSDNGFGLLSRRGLIHTQKEGLIY
KVFAGVERREVDKNYTLQGKTLQTKMETVDINKTVDEYRVGATIGYSPVAFSLSLNKVTSEFRTGDDYSYINGDITFFF
>Mature_319_residues
MNKYSYCATMIAAILSTTTMANASSLAISVANDDAGIFQPSLNALYGHKAADRGDYTAGLFLGYSHDLTDASQLSFHIAQ
DIYSPSGANKRKPEAVKGDRAFSAFLHTGLEWNSLATNWLRYRLGTDIGVIGPDAGGQEVQNRAHRIIGAEKYPAWQDQI
ENRYGYTAKGMVSLTPAIDILGVNVGFYPEVSAVGGNLFQYLGYGATVALGNDKTFNSDNGFGLLSRRGLIHTQKEGLIY
KVFAGVERREVDKNYTLQGKTLQTKMETVDINKTVDEYRVGATIGYSPVAFSLSLNKVTSEFRTGDDYSYINGDITFFF

Specific function: Unknown

COG id: COG3528

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34871; Mature: 34871

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKYSYCATMIAAILSTTTMANASSLAISVANDDAGIFQPSLNALYGHKAADRGDYTAGL
CCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCEEEE
FLGYSHDLTDASQLSFHIAQDIYSPSGANKRKPEAVKGDRAFSAFLHTGLEWNSLATNWL
EEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHH
RYRLGTDIGVIGPDAGGQEVQNRAHRIIGAEKYPAWQDQIENRYGYTAKGMVSLTPAIDI
HHHHCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEECCCEEE
LGVNVGFYPEVSAVGGNLFQYLGYGATVALGNDKTFNSDNGFGLLSRRGLIHTQKEGLIY
EEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCEEECCCCEEE
KVFAGVERREVDKNYTLQGKTLQTKMETVDINKTVDEYRVGATIGYSPVAFSLSLNKVTS
EEECCCHHHHCCCCEEECCCEEEEEEEEEECCCCHHHHCCCEEECCCCEEEEEEHHHHHH
EFRTGDDYSYINGDITFFF
HHCCCCCCEEECCCEEEEC
>Mature Secondary Structure
MNKYSYCATMIAAILSTTTMANASSLAISVANDDAGIFQPSLNALYGHKAADRGDYTAGL
CCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCEEEE
FLGYSHDLTDASQLSFHIAQDIYSPSGANKRKPEAVKGDRAFSAFLHTGLEWNSLATNWL
EEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHH
RYRLGTDIGVIGPDAGGQEVQNRAHRIIGAEKYPAWQDQIENRYGYTAKGMVSLTPAIDI
HHHHCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEECCCEEE
LGVNVGFYPEVSAVGGNLFQYLGYGATVALGNDKTFNSDNGFGLLSRRGLIHTQKEGLIY
EEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCEEECCCCEEE
KVFAGVERREVDKNYTLQGKTLQTKMETVDINKTVDEYRVGATIGYSPVAFSLSLNKVTS
EEECCCHHHHCCCCEEECCCEEEEEEEEEECCCCHHHHCCCEEECCCCEEEEEEHHHHHH
EFRTGDDYSYINGDITFFF
HHCCCCCCEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA