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The map label for this gene is ydjN [H]

Identifier: 29141665

GI number: 29141665

Start: 1268517

End: 1269908

Strand: Reverse

Name: ydjN [H]

Synonym: t1200

Alternate gene names: 29141665

Gene position: 1269908-1268517 (Counterclockwise)

Preceding gene: 161486807

Following gene: 29141663

Centisome position: 26.5

GC content: 54.6

Gene sequence:

>1392_bases
ATGAATTTTCCATTAATTGCGAACATTGCGGTGTTCGTCATTCTGCTGTTTGTACTGGCGCAGGCCCGTCATAAACAGTG
GAGTCTGGCTAAAAAAGTGCTTGTCGGCCTTGTGATGGGCGTGGTCTTTGGTCTGGCCCTGCACACCATTTATGGCGCTG
ACAGTCAGGTGTTAAAAGACTCCATTCAGTGGTTCAATATTGTCGGCAACGGTTATGTGCAATTGCTACAAATGATTGTG
ATGCCGCTGGTATTCGCCTCTATTTTAAGCGCCGTGGCACGACTGCATAACGCCTCTCAATTGGGGAAAATCAGTTTTCT
GACTATCGGCACGCTGCTGTTTACTACCTTTATCGCAGCGCTGGTGGGCGTGCTGGTCACCAATCTGTTCGGACTGACGG
CGGAAGGTCTGGTTCAGGGCGGCGCGGAAACCGCGCGTCTGAATGCCATTGAGACGAGCTATGTCGGCAAAGTGGCCGAT
CTCAGCGTGCCGCAACTGGTGCTGTCTTTTGTACCGAAAAATCCGTTTGCGGATCTGACTGGCGCAAATCCTACGTCTAT
TATCAGCGTGGTGATTTTCGCCGCATTCCTGGGCGTGGCCGCGCTTAAACTGCTGAAAGATGATGCGCCAAAAGGCGAGC
GTGTGCTTGTTGCTATCGATACCCTGCAAAGCTGGGTGATGAAGCTGGTGCGTCTGGTGATGCAACTTACGCCTTACGGC
GTACTGGCGCTGATGACGAAAGTGGTTGCCGGCTCTAATTTGCAGGACATCATTAAGCTTGGAAGCTTCGTGGTAGCGTC
ATATCTTGGTCTGGCGATAATGTTTGTGGTTCACGGCATACTATTGGGCGTGAACGGGATTAGCCCGCTGAAATATTTCC
GCAAGGTGTGGCCGGTGCTGACATTTGCCTTTACCAGCCGCTCCAGCGCCGCCTCCATTCCACTTAATGTCGAAGCGCAA
ACCCGCCGTCTGGGCGTGCCGGAGTCCATCGCCAGCTTTGCTGCCTCTTTTGGCGCGACCATCGGCCAAAACGGTTGTGC
CGGTCTTTATCCTGCGATGTTAGCGGTAATGGTTGCGCCGACGGTCGGCATCAACCCCTTAGACCCCGTATGGATAGCCA
CGCTGGTGGGTATCGTTACCGTAAGTTCGGCGGGTGTTGCCGGCGTTGGCGGCGGCGCGACCTTCGCCGCGCTGATTGTG
CTGCCTGCCATGGGCTTACCGGTCACGCTGGTCGCGCTGTTAATCTCCGTCGAACCGTTGATTGATATGGGCCGTACCGC
ACTGAACGTGAGCGGCTCAATGACCGCGGGTACGCTGACCAGCCAGTGGCTGAAGCAGACCGATAAAACCATTCTCGATA
GCGAAGAAGACGCTGAACTGGCGCATCGATAA

Upstream 100 bases:

>100_bases
TCCATTTGAATATAAGAGCCAGCTCACAGTTCTGCTAATCTTGCGCGAACAGAATCGCTAAAACACAGCGCTTCATAATA
AAAAAATCAGGAGAACGGGG

Downstream 100 bases:

>100_bases
TACATTATCGGGAGTTCACATCGTCTGAGACACGACGATCGGCAACTCAAAATGTCTGTCACTAAAAACGCCGGTCTCCA
GTACCGGCGTTTTGTTTTTT

Product: sodium:dicarboxylate symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MNFPLIANIAVFVILLFVLAQARHKQWSLAKKVLVGLVMGVVFGLALHTIYGADSQVLKDSIQWFNIVGNGYVQLLQMIV
MPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTFIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIETSYVGKVAD
LSVPQLVLSFVPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLVAIDTLQSWVMKLVRLVMQLTPYG
VLALMTKVVAGSNLQDIIKLGSFVVASYLGLAIMFVVHGILLGVNGISPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQ
TRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPVWIATLVGIVTVSSAGVAGVGGGATFAALIV
LPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKTILDSEEDAELAHR

Sequences:

>Translated_463_residues
MNFPLIANIAVFVILLFVLAQARHKQWSLAKKVLVGLVMGVVFGLALHTIYGADSQVLKDSIQWFNIVGNGYVQLLQMIV
MPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTFIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIETSYVGKVAD
LSVPQLVLSFVPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLVAIDTLQSWVMKLVRLVMQLTPYG
VLALMTKVVAGSNLQDIIKLGSFVVASYLGLAIMFVVHGILLGVNGISPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQ
TRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPVWIATLVGIVTVSSAGVAGVGGGATFAALIV
LPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKTILDSEEDAELAHR
>Mature_463_residues
MNFPLIANIAVFVILLFVLAQARHKQWSLAKKVLVGLVMGVVFGLALHTIYGADSQVLKDSIQWFNIVGNGYVQLLQMIV
MPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTFIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIETSYVGKVAD
LSVPQLVLSFVPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLVAIDTLQSWVMKLVRLVMQLTPYG
VLALMTKVVAGSNLQDIIKLGSFVVASYLGLAIMFVVHGILLGVNGISPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQ
TRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPVWIATLVGIVTVSSAGVAGVGGGATFAALIV
LPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKTILDSEEDAELAHR

Specific function: Unknown

COG id: COG1823

COG function: function code R; Predicted Na+/dicarboxylate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]

Homologues:

Organism=Homo sapiens, GI223468564, Length=287, Percent_Identity=31.0104529616725, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI223468566, Length=287, Percent_Identity=31.0104529616725, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI5032093, Length=286, Percent_Identity=30.7692307692308, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI194239697, Length=468, Percent_Identity=23.7179487179487, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI21314632, Length=473, Percent_Identity=26.215644820296, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI4827012, Length=492, Percent_Identity=25.2032520325203, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI40254478, Length=517, Percent_Identity=25.531914893617, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI66773030, Length=299, Percent_Identity=29.0969899665552, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI169790839, Length=469, Percent_Identity=24.3070362473348, Blast_Score=78, Evalue=2e-14,
Organism=Escherichia coli, GI1788024, Length=463, Percent_Identity=95.6803455723542, Blast_Score=835, Evalue=0.0,
Organism=Escherichia coli, GI1790514, Length=442, Percent_Identity=26.9230769230769, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI1789947, Length=395, Percent_Identity=23.7974683544304, Blast_Score=115, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI71983099, Length=419, Percent_Identity=27.6849642004773, Blast_Score=108, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI71983106, Length=420, Percent_Identity=27.1428571428571, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17541374, Length=452, Percent_Identity=25.2212389380531, Blast_Score=105, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI193206505, Length=487, Percent_Identity=24.435318275154, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI193206654, Length=437, Percent_Identity=26.5446224256293, Blast_Score=99, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI71996953, Length=444, Percent_Identity=24.7747747747748, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17537407, Length=449, Percent_Identity=25.3897550111359, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24583025, Length=481, Percent_Identity=24.1164241164241, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI17137668, Length=481, Percent_Identity=24.1164241164241, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24583023, Length=481, Percent_Identity=24.1164241164241, Blast_Score=83, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991 [H]

Pfam domain/function: PF00375 SDF [H]

EC number: NA

Molecular weight: Translated: 48680; Mature: 48680

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCC
>Mature Secondary Structure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HHCCCHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]